Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01909 ATGGCAATACTTGGACTATACCCCAAATTCTTCTTCTCTCAAAATCCAATCCCAAAACCCTTCTTAAACCCTAATTTCAATCCCAAATCTTATCAAATCTTCAATTTCAAACCAATATCTCAATTTACCCATCAATCAACAACGACCACTCCCAATCGTGGCTTAATTTTCAGAGAAAAAGTTCTATACCTTGAAAAACTCAAAGTAAACCCAGAAAAAGCCTTCAAACAAAACCCTAATCTTCGTTCTTGTCCTCTAAGAACCCTAAAATCTGTAGAACAATGTCTTTCATCAATTGGCATACACAGAAGCCAAATGGGTCGAATTCTTGACATGCTTCCTGAACTTCTCACGTGTGAACCACACAGTGATATTTACCCCCTTCTTGATTTTCTTCTCAATGAGGTTGAAATTCCTTACCATGATGTTCAAAAATCAATCTTGCGGTGTCCTAGATTGTTGGTTAGTAGTGTAGAGAATCGATTGAGACCTGCTTTGTGTTTTTTGAGGGAATTAGGGTTTGTTGGACCCCACTCTCTCACGTGTCAGACAACATTGCTTTTGGTTTCGAGTGTTGAGGATACCCTTTTGCCTAAAGTTGAGTTTTTGATGGGTTTGGGGTTCACTCGTGTGGAGGTGTCGAATATGGTTGTGAGGTCACCTGGGTTATTGACTTTTAGTGTGGTTAAGAATTTGGCTCCTAAATTTGAGTTTTTCATGAAGGAGATGAATGGTGATGTTGCTGAGTTGAAGAGGTTTCCTCAGTATTTCTCTTTTAGCTTGGAAGGGAGGATTAAGCCGCGGCACGCGATGTTGGCTCGGCTTCGATTGTCGCTTCCTTTGCAAGAGATGTTGCAGGTTAGTGATGGTGGTTTTGATTCTAGGTTGCTTGATTTGCGGTTAAAGGAACTTGAGGGAAGATAA 924 0.4037 MAILGLYPKFFFSQNPIPKPFLNPNFNPKSYQIFNFKPISQFTHQSTTTTPNRGLIFREKVLYLEKLKVNPEKAFKQNPNLRSCPLRTLKSVEQCLSSIGIHRSQMGRILDMLPELLTCEPHSDIYPLLDFLLNEVEIPYHDVQKSILRCPRLLVSSVENRLRPALCFLRELGFVGPHSLTCQTTLLLVSSVEDTLLPKVEFLMGLGFTRVEVSNMVVRSPGLLTFSVVKNLAPKFEFFMKEMNGDVAELKRFPQYFSFSLEGRIKPRHAMLARLRLSLPLQEMLQVSDGGFDSRLLDLRLKELEGR 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01909 307 Gene3D Transcription termination factor 3, mitochondrial 72 305 IPR038538 -
Mepo5g01909 307 PANTHER CGI-12 PROTEIN-RELATED 72 296 IPR003690 GO:0003690|GO:0006355
Mepo5g01909 307 Pfam mTERF 135 292 IPR003690 GO:0003690|GO:0006355
Mepo5g01909 307 Pfam mTERF 73 174 IPR003690 GO:0003690|GO:0006355
Mepo5g01909 307 SMART mt_12 178 209 IPR003690 GO:0003690|GO:0006355
Mepo5g01909 307 SMART mt_12 144 175 IPR003690 GO:0003690|GO:0006355
Mepo5g01909 307 SMART mt_12 247 278 IPR003690 GO:0003690|GO:0006355
Mepo5g01909 307 SMART mt_12 107 139 IPR003690 GO:0003690|GO:0006355
Mepo5g01909 307 SMART mt_12 72 102 IPR003690 GO:0003690|GO:0006355
Mepo5g01909 307 SMART mt_12 214 246 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01909 Mepo-Chr5 21029978 21031043 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mepo5g01909 mTERF 6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01909 K15032 - gmx:100785219 387.882