Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01902 ATGGAGGATCAAAACATGGACCTTGAACTTACTCTTTCATTGGGTTCAATCCCAAAACGGTCAGAAACAATCAACAACGCTCCTGATGTGACAAAAGTTGTCAAAATTGATGCTGGTTCAATCACTGGAGCAAAGTCGGGGGGTTCGAACTCTGAACAAGTGCAAAGGGGGAGGGGGAGGCCTCCAAAGTACGGGGTTAGTAGGAGCACGTTTTCTCCAATGACGCCTCCATCGGGACTTGCTACTAGTCACTCTTATGAAAGTGAGGAGAAGGGTGGAAAGGAACGATTTGGAGGTTCATTAGATTCCACTGGAGGATTTGTTGAAGAAAAGACCGGAGAAAGCATTACACCTTATGTATTGATTGTGAACCCTGGAGAGGATGTGGTTCAAAAGATATCAGCATTTTTTGAGAATGGTCCTCGACAAGCTGTTTGCATACTTGCTGCTACCGGAGCTGTATCAAATGTCACCCTTTACCAACCTGGTGTTTCTGATGGATTTTTAAGATATGAGGGCCACTTTCCTATTTTATCTTTAAATGGACCATGCACCTTCCCTAGTGGTTGTGCACAGAAGGAAATTGAATTGATGAGTGTTTCCTTGTCTAAACCTGATGGGAATGTTTTTGGAGGTGGTATTGGTAAATCAATGATAGCTGCTACTCCTATTCATCCATTGTCACACACTTACTCAAAGTTTCTCTTTTTCCATCAGCTTGTTTTGGGAACTTTCGATATGCTAACTGATGACCTAGCAACAACGAGTACTAATGGTGTAGCCGTAGAAGAGAAGAATAAAGATGTGATAGCTGAAACAACAACTAATGGTGCATCAATGTCAGAAAATGTCACTATTGTTGGAGAACCTAGCCACCTGAAAAAGTTTCCATATCTTGATCTCAACCGTCACCCCGAAATGTGA 924 0.4242 MEDQNMDLELTLSLGSIPKRSETINNAPDVTKVVKIDAGSITGAKSGGSNSEQVQRGRGRPPKYGVSRSTFSPMTPPSGLATSHSYESEEKGGKERFGGSLDSTGGFVEEKTGESITPYVLIVNPGEDVVQKISAFFENGPRQAVCILAATGAVSNVTLYQPGVSDGFLRYEGHFPILSLNGPCTFPSGCAQKEIELMSVSLSKPDGNVFGGGIGKSMIAATPIHPLSHTYSKFLFFHQLVLGTFDMLTDDLATTSTNGVAVEEKNKDVIAETTTNGASMSENVTIVGEPSHLKKFPYLDLNRHPEM 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01902 307 ProSiteProfiles PPC domain profile profile. 113 266 IPR005175 -
Mepo5g01902 307 Pfam Plants and Prokaryotes Conserved (PCC) domain 118 224 IPR005175 -
Mepo5g01902 307 CDD DUF296 117 222 IPR005175 -
Mepo5g01902 307 MobiDBLite consensus disorder prediction 68 85 - -
Mepo5g01902 307 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 40 281 IPR039605 GO:0003680
Mepo5g01902 307 Gene3D - 118 234 - -
Mepo5g01902 307 SUPERFAMILY AF0104/ALDC/Ptd012-like 115 224 - -
Mepo5g01902 307 MobiDBLite consensus disorder prediction 40 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01902 Mepo-Chr5 20915217 20919047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01902 41 245 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 39.720 3.17e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01902 - - mtr:11422654 449.899