Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01899 ATGCAGAATCAAAGTATGCATTTTGTTCTATCCACTGATGCAAAACCAAGGCTCAAATGGACTCCTGAACTTCACCAAAGATTCATTGATGCAATTAATCAACTTGGAGGTGCAGCTAAAGCAACACCAAAGAGTATTATGAAAGTGATGGAAATTCCAGGACTTACTTTGTACCATCTCAAGAGCCATTTACAGAAATATAGACTTGGGAAAAGCCAACAACTAGAAACCTGCTCTGACAACAAACAACAAGTATACACAGAAACCAAGAGCTGTGATGAACAATGCAGCAGAGAAATCAGTCTTGGGGACGAGAATCAAATCACTGAGAACATGGAGATATCTCATGCTCTAGAAATGCAAATGGAAGTAGAAAGGAAACTTAATGAACAAATAGAGGTGCAGAAACATTTGCAACTTCGAATCGAAGCTCAAGGAAAATATTTACAATCGGTACTAATGAAGGCGCAGGAAGCCCTCTCTGGATACAATTCTTCACCAATTGGGATAAAACTTACAAAAGATGAACTCTCTCAGTTGGTTACTATGATCAACAATGCTTGTCCAAGTTCTCCAATCTCAGATCTAACAGAATCAAGAGGGTTAAGTTTAAACTATGAGGAGAGGAAACAGGACAATGGAACTTCTTTGTGTTCATTGGAAAGTTCTTTGACATCTTCTGAAAGCTCAGAGAGAAAGGAAGAGAAACACTCATTGGAAGATATAGGAGACTTCAAAAATTCTAATACTATTTCACTTGAATTGCCACTAATGGCCATGCAATCAGAAGAGAAATCATTGTCGTGTCCAATGTCCGTGTATGTGTTTCGTAACGATGATTCAAGTAATGAAGCTAATGGGAGAAAGAGAAATGAAGAAACTAAATTTGATGGTAGCTATGTTGAGAATTATTCATTAAGGAAAAGATGTGGCAACAAGTTGAAGAAAGCTAAGTTGTCAGAAAAGTTTGACTTGAATAGCCAATGTCAGAATGACATGGACTCAACAAGTTCAAAATTGCTATTAGACTTAAATTGCAGTTTAAACTTTTGTGAACCATGA 1062 0.3701 MQNQSMHFVLSTDAKPRLKWTPELHQRFIDAINQLGGAAKATPKSIMKVMEIPGLTLYHLKSHLQKYRLGKSQQLETCSDNKQQVYTETKSCDEQCSREISLGDENQITENMEISHALEMQMEVERKLNEQIEVQKHLQLRIEAQGKYLQSVLMKAQEALSGYNSSPIGIKLTKDELSQLVTMINNACPSSPISDLTESRGLSLNYEERKQDNGTSLCSLESSLTSSESSERKEEKHSLEDIGDFKNSNTISLELPLMAMQSEEKSLSCPMSVYVFRNDDSSNEANGRKRNEETKFDGSYVENYSLRKRCGNKLKKAKLSEKFDLNSQCQNDMDSTSSKLLLDLNCSLNFCEP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01899 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 72 IPR017930 -
Mepo5g01899 353 Gene3D - 14 72 - -
Mepo5g01899 353 Pfam MYB-CC type transfactor, LHEQLE motif 112 158 IPR025756 -
Mepo5g01899 353 MobiDBLite consensus disorder prediction 227 243 - -
Mepo5g01899 353 FunFam Myb family transcription factor 14 72 - -
Mepo5g01899 353 MobiDBLite consensus disorder prediction 213 243 - -
Mepo5g01899 353 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Mepo5g01899 353 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 277 IPR044848 GO:0003700
Mepo5g01899 353 Pfam Myb-like DNA-binding domain 17 68 IPR001005 -
Mepo5g01899 353 NCBIfam myb-like DNA-binding domain, SHAQKYF class 15 70 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01899 Mepo-Chr5 20863019 20865357 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01899 6 263 G2-like Transcription Factor Family AT1G69580 50.746 2.75e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo5g01899 Myb_DNA-binding 4.5e-08 CL0123