Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01879 ATGGCTTTCGAAGTTGTATATTATCCTACTGCTGAAGGTTGGTGTAATTTTGTAGCTGATGCCAAAGTTGTGGAGGATGCTATGAAGATTAAATGGAATCCTGGATTGAGAATTAAACTTTCTTTGAAGAAAGACAATTCTTCAAAGAGATGTTCAAATTTTGAGGGAACAATATCTGCTCTATCTGCTCCTAATCAAAAGCTTAGGACTGCTAAAGATTCTGCCTTACACAATGATATAGAGGGAGACTCCTCCATCCCAAATATAGAGTTTCATTCTTCAGCGACGAGTTCCTTCAATGAAACGTCGTTGAATAGCGATCCTTTGCTTGATGACATACAGGGAGCCAGGCACAATCTTTTTTCCGCATCAACTTCTTCCAACTGCAACACCAAAAAACTTAGTCCTGGTTCAATTATGTTATTTGGTCAGATCATACGTCCCGTTGGAAGTGATTTGCACGATTCAGATATCAAGGGAGAGGATCGCGGTAAGGGCCGCAATGAAGATTGTCTGGTGTAG 522 0.4042 MAFEVVYYPTAEGWCNFVADAKVVEDAMKIKWNPGLRIKLSLKKDNSSKRCSNFEGTISALSAPNQKLRTAKDSALHNDIEGDSSIPNIEFHSSATSSFNETSLNSDPLLDDIQGARHNLFSASTSSNCNTKKLSPGSIMLFGQIIRPVGSDLHDSDIKGEDRGKGRNEDCLV 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01879 173 Pfam Auxin response factor 2 63 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mepo5g01879 173 MobiDBLite consensus disorder prediction 152 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01879 Mepo-Chr5 20603922 20604816 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01879 1 60 B3 DNA Binding Superfamily AT1G77850 43.333 1.19e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01879 - - mtr:11412789 271.166