Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01876 ATGTTGAATGTTGATGTAGTTGGTAACAAGAGAAGGAAGAGATGTGGGAGGGTTTTTAGGTTCAAGAATTTTGGGGAACAAGGGTACCCAGTTATGTTTAATGGGACATCATTTCGTGAGAATGTGAATGGTTTACTTGAATATGCAAATTTGGAGAGTAATTTAAAAATGGGAATGCCTATGTGGTCATTTCAACTTGAACTGCATCATCATCCACCTTTGTATATATTGTTGTTTGTGATTGAAGAATCAATTGAGGCAGAACTGAATCGTCATTGCAACCATTGTCAATATGTTGGCTGGGGCAACCATTTCATTTGCAACAAGAAGTATCATTTCCTATTACCTTCAAAGGAGACACTAAGTAGCTGCACAAGTTGTGAAAGCTGCTGTGATTCAAATGGTACAATGAATATTAGTGGTAAGTCCAACAAATTAATAGAATTAGAGGGACATATGATGCATGGTGTATTTCACTCTAATGGATTTGGGCATTTGCTATGTGTCAATGGATTGGAAACGGGTTCCAATTTGGGTGGTAACCAGATCATGGAGTTTTGGAATCGTTTGTGCAATGGATTGCAAGCAAGGAAAGTGAGTTTGAATGACACATCACAAAAAAGAGGCATGGAACTAAGACTTGTGAATGGAATAGCATACAGTGAGCCATGGTTTGGTCGTTGGGGATACAAATTTGGTCGAGGATGTTTTGGTGTAACACAATCAATGTACCAAAAAGCCATAGAAGCAATAAGAAGCATGCCACTATACCTACTCACACATCACATTGCAAATTCCAATCATGAAATCCCATCAATCTTCTCAAGGTACCAAACACTTTCTGATCACTCTCTTGTCACCCTTGGTGACTTATTTCACTACATGTTAGAGCTCAAGTCGCGGCTTCCCCATGAAACTTGCATTGGTTCCTTCAACACAAGCACCTTAGTTGAAACAAATTGTCGTTGGTCCCCTAAAAGGATTGAAATGGCAACACGGGTCATTGTCGAGGCCTTAAAAAGAACAGAATTCAGGTGGATTTCAAGACAAGAAGTGAGAGATGCCGCACGTGCTTACATCGGAGACACTGGTTTGTTGGATTTTGTTTTGAAGTCGCTAGGAAACCACGTTGTTGGAAACTATTTGGTCCGTCGAAGCTTGAATCCAGTTACAAAAGTGTTCGAGTATTGTTTAGAAGACATTTCTAATGTTTACCCTTGTAATCATGAAGAGTTGGTTATGAGTAGTAGTAGTAGTAGTAATAAAGTTAAGGAGAAGTACAAGATCACAAGGGGTCAACTTATGAAGGACATGATTTGTTTGTACAAGTATATACTTATTGACACAAAACCAAGTATAGGGGCAGAATTTCTTTCAGCTATACCATTGGCAGCTAGGATAATTCTTGACACTAAATATCTTATCAAAGACTATGGAGAGGTTCCTTTGCATGTTGAGTTAGGATCAAAAGAAAAATGCAATCTTTATTGTACAATTTTGTTAAGGAATGTTAATAATGTAGGGCATGATCGTGAGTATTATTTGAACAATGATATTCCAATGCCACCTTATGAATGTATCACATTGAAAAGTTGTGCTACAATTAATGACTTAAAGCTAGAAGTTGAAAGGAATTTTAGGGAAATCTATTGGGGGTTAAGGAGTTTTGTGGTGCAACCAAATGGGAATTTGATGAATGCAAAAGGGAATGAAATGGTTTTTGGGATGATTGAAGTGGGTGGAAAACTTGTACTTGAAGGTTGGCATGGTGGTGAAATTGGAATCAATACGGTTGAGCAAATATGTGAAAGGGATCCAAAGAAGGGAATTGTGGAGTGCATTTGTGGAACTAAAGAATATGATGGTGAGAGAATGGTGTCTTGTGATATTTGTGAAATTCGGCAACATACTAGGTGTGTTAGAATTCCAAATGATGAAGAAGTTCCTCATATTTTTCTATGCAAAAGGTTTCTTCTTCCTCCATTATCCATGCTGAGAGCTTCGTCTAAATCCGATCATACCGGAGTTCGTATCGTTGTCGCCGGAGACAAACGAACCGGTAAATCCACCCTCATTCGCGCCGTGGCCTCCAACAAATTCGAGAAGAATGTCGGCCCTTTATTGCGTCCCATAAGGCTGCCTACACATCACTGTGTGGATCATGTGCCGATCACTATCGTTGACACTCGTATTGAGGACAGTGATAGAGTTTTTAAAGAAATTAAGCGGGCTGACGTTGTTGTCCTCACTTATGCATGTGATCGGCCTAATACACTTACAAATCTAACTACATTTTGGCTCCCTCTTCTTCGCGATTTAAAGGTCAAAGTTCCTGTTATAGTGGTTGGCTGTAAGCTTGATCTGCGAGATGAAAATCAGCAGGAAAATCTAGAACATGGGATGTCGCAAATAATGCTACAGTTCCACGAGATTGAAGCATACTTTGAGTGTTCAGCATATAGGCTTATCCAGAGTGTTGAATTAACAAATGAAGCAATTGATTTCTTGAAGACAGTTTTTGATGAACTTGACAGTGATTTTGATGGGATGCTCCAACCCTGTGAACTTGAAGAATTGTTTTCTACTGCTCCAGACAGTCCCTGGATTGAATATCCATATGAGGATGCTGTAAAAAGGAATGCATATGGAGGACTATCACTTGATGCGTTTTTGTCAGAGTGGGCACTCATGACACTTCTAAATCCAACCTTTAGTGTGGAGAACCTGATATGCATTGGTTATCCTGGTGATCCATCATCTGCAATCCGTGTGACTAGGATGCGAAACATGGATCGCCAAAAACAACATTCAGAAAGAAATGTATTGCAGTGCTTCATTTTTGGGCCTAGGAAGGCCGGAAAATCTGCATTATTGAATTCTTTCATTGGAAGGTCATATTCTGAAGCTTACAATCCAACCAACGAGGATCGCTATGCTGTAAATGTTGTTGATATTTCTATGGAAAACAAAAAATATCTTGTGCTGAGAGAGATTTCTGAAGGTGGAGTCACAAAGCTGCTAACCAATAAGGAGTCTTTGGCCTCATGTGACATTGCGGTTTTTGTTTACGACAGGTCTGATGAGTCTTCATGGGATGCCGCATATGAACTCTTGGTAAAAATTGCTGAGCATGGAACTTATACTGGCTTTGAGATGCCTTGTCTTATGGTGGCAGCTAAAGATGATAAGGATTCATTTACAATGGGTATACGAGAGACGACTGGGGTTAGTCAACACATGGGGGTTGAGGTTCCTATTTCAATCAGTGTGAAGTCAGGAGATTTAAATAATGTATTCCACCGAATTGTAAGTGCTGCTGAGCACCCTCATTTAAGCATTCCAGAAACTGAAGCTGGAAAAAGACACAAGAAGTTCCATAGGCTCATAAAAGGATCTCTTCAGTTTGCTTCAGTTGCAGTGGCCGTAGCGTTTGGTGTGGCTGCTGCCAGGAAGAATGCTACTGGACGGAGGAATGCTGCTGCGCGGAAGAATGCGTCTGGTTAA 3504 0.4004 MLNVDVVGNKRRKRCGRVFRFKNFGEQGYPVMFNGTSFRENVNGLLEYANLESNLKMGMPMWSFQLELHHHPPLYILLFVIEESIEAELNRHCNHCQYVGWGNHFICNKKYHFLLPSKETLSSCTSCESCCDSNGTMNISGKSNKLIELEGHMMHGVFHSNGFGHLLCVNGLETGSNLGGNQIMEFWNRLCNGLQARKVSLNDTSQKRGMELRLVNGIAYSEPWFGRWGYKFGRGCFGVTQSMYQKAIEAIRSMPLYLLTHHIANSNHEIPSIFSRYQTLSDHSLVTLGDLFHYMLELKSRLPHETCIGSFNTSTLVETNCRWSPKRIEMATRVIVEALKRTEFRWISRQEVRDAARAYIGDTGLLDFVLKSLGNHVVGNYLVRRSLNPVTKVFEYCLEDISNVYPCNHEELVMSSSSSSNKVKEKYKITRGQLMKDMICLYKYILIDTKPSIGAEFLSAIPLAARIILDTKYLIKDYGEVPLHVELGSKEKCNLYCTILLRNVNNVGHDREYYLNNDIPMPPYECITLKSCATINDLKLEVERNFREIYWGLRSFVVQPNGNLMNAKGNEMVFGMIEVGGKLVLEGWHGGEIGINTVEQICERDPKKGIVECICGTKEYDGERMVSCDICEIRQHTRCVRIPNDEEVPHIFLCKRFLLPPLSMLRASSKSDHTGVRIVVAGDKRTGKSTLIRAVASNKFEKNVGPLLRPIRLPTHHCVDHVPITIVDTRIEDSDRVFKEIKRADVVVLTYACDRPNTLTNLTTFWLPLLRDLKVKVPVIVVGCKLDLRDENQQENLEHGMSQIMLQFHEIEAYFECSAYRLIQSVELTNEAIDFLKTVFDELDSDFDGMLQPCELEELFSTAPDSPWIEYPYEDAVKRNAYGGLSLDAFLSEWALMTLLNPTFSVENLICIGYPGDPSSAIRVTRMRNMDRQKQHSERNVLQCFIFGPRKAGKSALLNSFIGRSYSEAYNPTNEDRYAVNVVDISMENKKYLVLREISEGGVTKLLTNKESLASCDIAVFVYDRSDESSWDAAYELLVKIAEHGTYTGFEMPCLMVAAKDDKDSFTMGIRETTGVSQHMGVEVPISISVKSGDLNNVFHRIVSAAEHPHLSIPETEAGKRHKKFHRLIKGSLQFASVAVAVAFGVAAARKNATGRRNAAARKNASG 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01876 1167 Gene3D - 1005 1106 IPR027417 -
Mepo5g01876 1167 Pfam EF hand associated 868 935 IPR013566 -
Mepo5g01876 1167 CDD Miro2 938 1120 - -
Mepo5g01876 1167 ProSiteProfiles Miro domain profile. 939 1108 IPR020860 GO:0003924|GO:0005525
Mepo5g01876 1167 Gene3D - 823 999 - -
Mepo5g01876 1167 Pfam Ras family 945 1081 IPR001806 GO:0003924|GO:0005525
Mepo5g01876 1167 Pfam Ras family 677 821 IPR001806 GO:0003924|GO:0005525
Mepo5g01876 1167 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 13 656 - -
Mepo5g01876 1167 CDD PHD_MMD1_like 612 656 - -
Mepo5g01876 1167 FunFam Mitochondrial Rho GTPase 1006 1107 - -
Mepo5g01876 1167 SUPERFAMILY FYVE/PHD zinc finger 607 655 IPR011011 -
Mepo5g01876 1167 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 938 1113 IPR027417 -
Mepo5g01876 1167 ProSiteProfiles Miro domain profile. 673 841 IPR020860 GO:0003924|GO:0005525
Mepo5g01876 1167 SMART rho_sub_3 678 839 IPR001806 GO:0003924|GO:0005525
Mepo5g01876 1167 SMART PHD_3 612 658 IPR001965 -
Mepo5g01876 1167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 603 674 IPR013083 -
Mepo5g01876 1167 ProSiteProfiles EF-hand calcium-binding domain profile. 831 866 IPR002048 GO:0005509
Mepo5g01876 1167 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 676 834 IPR027417 -
Mepo5g01876 1167 Gene3D - 675 822 IPR027417 -
Mepo5g01876 1167 SMART rab_sub_5 676 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01876 Mepo-Chr5 20573955 20587149 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01876 7 665 PHD Transcription Factor Family AT5G22260 51.830 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01876 K26271 - gmx:100780210 1074.31