Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01846 ATGGCTGAGTCACAAGGTGGTGATGGTAGTAGTTCGGGAAACAGGCGCAATAAAAGCGCAAATGCTTCAAAGCGTGCAATGGCAAGAGCAACACAAGATGAACCAGTTATAACGCCGTGTGGTGCTTGCAAGTTCTTGAGGAGGAAGTGTAGTAGTGGATGCATCTTTGCACCCTACTTTGGTACCGACCAAGGTGCAGCTAAGTTTGCGGCTGTGCACAAGGTGTTTGGTGCTAGCAATGTGTCGAAACACTTGTCCAACATTCCCGCTAACCATCGCCATGAAGCTGCGGCGACTATTTCCTATGAGGCTCAAGCTAGGCTAGCTGATCCGGTTTATGGTTGTGTTTCCACCGTTCTTGCTTTGCAGCAACAGGTGGCAGCTATGCAAGCAGAGGTCTTAATGATGCAAACTCAATTGATGAATAAGAGGCTTGCATATGCAAATGCAAGTACTCTTCAAACCCCGTATCAGCCGCCGTTTCAAATTGTACAGCAACCAAACTTCAATGTACCTGTGCAGCCAGCATATTCCAACAACTCATCTGCTTCCACCACCAACCTTATGAACATGAACAACTTCAACCCTGGTTTTGGCCTCAAAATGGAGACAACACCTTCATCACAGAGCTTGTAG 636 0.4717 MAESQGGDGSSSGNRRNKSANASKRAMARATQDEPVITPCGACKFLRRKCSSGCIFAPYFGTDQGAAKFAAVHKVFGASNVSKHLSNIPANHRHEAAATISYEAQARLADPVYGCVSTVLALQQQVAAMQAEVLMMQTQLMNKRLAYANASTLQTPYQPPFQIVQQPNFNVPVQPAYSNNSSASTTNLMNMNNFNPGFGLKMETTPSSQSL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01846 211 ProSiteProfiles LOB domain profile. 38 140 IPR004883 -
Mepo5g01846 211 MobiDBLite consensus disorder prediction 1 26 - -
Mepo5g01846 211 Pfam Lateral organ boundaries (LOB) domain 39 137 IPR004883 -
Mepo5g01846 211 MobiDBLite consensus disorder prediction 1 30 - -
Mepo5g01846 211 PANTHER LOB DOMAIN CONTAINING PROTEIN 38 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01846 Mepo-Chr5 20193139 20194203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01846 38 186 AS2 family AT3G03760 69.799 1.42e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo5g01846 LOB 5.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01846 - - aprc:113866578 245.358