Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01842 ATGGAATTGGAAGGTGATCATCATCAAAGTAATGGAATCCGAAGCAGACCCAATTTCCCTCTTCAGCTTTTAGAGAAAAAAGACAACAATATCCTAGATGTCTCCGAAGAACAAACTTGTACAACCACCGGAAACGATGGTTGTACTGCCATAATTTCATCAGACCAGCAGAAAAAACCTCCGCCTAAGCGCGCTTCGACGAAGGACCGGCACACAAAGGTAGACGGACGAGGCCGCCGGATCCGTATGCCCGCGGCCTGTGCCGCCAGAGTGTTCCAGCTCACGCGTGAGCTGGGACACAAATCAGACGGCGAGACGATTGAGTGGCTGCTTCAACAGGCAGAGCCAGCCGTCATCGCCGCCACCGGAACAGGAACAATTCCGGCCAACTTCACTTCACTTAATATATCTCTTAGAAGCTCAGGCTCAACCATGTCTGCGCCGTCTCACTATTTTCGAGGTAACTACTTTAACCCTAGCTCGTTCTCCTCCGCAGCGGCTCAGCTTAGAAACCGGGCTGAATGGGACAGAACTATGAACATGAACATGAACATGAACGTTGTAGCTGATGATTCTAGAAGGAGTAGTAACTCTAACATGTTGGAAAATCCTTCTTCTTTATCAGCAATGTTAAATTTCAACAACGTGCAAAATGCTATTCTACAAGCAAAACAAGAGCTCCGGGAAGAAAACGCCGCTGCCACCGCCTCTGTAGGTGGTGGTGGCGGAGGATTTGAATTGTTAGGTTCAGATTCAGATGGAAGCATAGGGAGAAAAAGAAGGTCGGAGCAAGAATTATTATCACAAAATATGGGAAGTTATTTGTTACAATCAAATGTAGGGTCACTTCCTTCAAGCCATGCTTCAAATACGGCAGCGTTTTGGATGGTAACTGGTAATGGGAACCAAGGTGTTAATGTTGGTGGTAGTAATGGAAATGATCCAATTTGGGCAATTCCTTCTGCTGGGAATAATGGTTTGTATAGAGGAGCTATGTCATCTCCTAATGGATTTCATTTCATGAATTTTGCTGCATCTCCAATGAATCTTATGCCTGGAAGTCAACTAGGTTCAGGAATCGTCGGCGGTGGCGGTGGAGGTGGTGGTATATTAGCCGAAAGCAATTTGAGTATGCTTTCGGCTATGAATGCCTATAGGCAGATTTCGACGAATGGTATGTCAGATTCGTCTGGACAACATCACGGCGGAGGTGGAGGAGGAGATGATGGACATGACTCAAGCAGTCAACATTCCTGA 1257 0.4646 MELEGDHHQSNGIRSRPNFPLQLLEKKDNNILDVSEEQTCTTTGNDGCTAIISSDQQKKPPPKRASTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSAPSHYFRGNYFNPSSFSSAAAQLRNRAEWDRTMNMNMNMNVVADDSRRSSNSNMLENPSSLSAMLNFNNVQNAILQAKQELREENAAATASVGGGGGGFELLGSDSDGSIGRKRRSEQELLSQNMGSYLLQSNVGSLPSSHASNTAAFWMVTGNGNQGVNVGGSNGNDPIWAIPSAGNNGLYRGAMSSPNGFHFMNFAASPMNLMPGSQLGSGIVGGGGGGGGILAESNLSMLSAMNAYRQISTNGMSDSSGQHHGGGGGGDDGHDSSSQHS 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01842 418 Pfam TCP family transcription factor 66 218 IPR017887 -
Mepo5g01842 418 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 41 394 IPR005333 GO:0003700
Mepo5g01842 418 MobiDBLite consensus disorder prediction 1 20 - -
Mepo5g01842 418 MobiDBLite consensus disorder prediction 61 75 - -
Mepo5g01842 418 MobiDBLite consensus disorder prediction 38 60 - -
Mepo5g01842 418 MobiDBLite consensus disorder prediction 244 264 - -
Mepo5g01842 418 MobiDBLite consensus disorder prediction 390 418 - -
Mepo5g01842 418 MobiDBLite consensus disorder prediction 38 75 - -
Mepo5g01842 418 Coils Coil 213 233 - -
Mepo5g01842 418 ProSiteProfiles TCP domain profile. 67 121 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01842 Mepo-Chr5 20076839 20078661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01842 265 417 TCP Transcription Factor Family AT1G69690 35.802 9.54e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mepo5g01842 TCP 3.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01842 - - gmx:100809966 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01842 5 20076839 20078661 Mepo5g01842 5 20076839 20078661 ECH
Mepo5g01842 5 20076839 20078661 Mepo1g01271 1 12466413 12468136 PCT