Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01827 ATGTTGAGTCTAAGATTCATTCTTTTGTTGGCTTTTGCATCTTCGATTTCTTCTTTTGAACCCCAAATGGGATCAACCCGTGTCGTCTTTCAGACAAATTATGGAGATATTGAGTTTGGTTTCTATCCAACTGTTGCACCCAAAACAGTTGACCACATTTTCAAGCTTGTGAGACTTGGAGGCTATAACACCAATCATTTCTTTCGGGTAGATAAGGGATTTGTAGCCCAAGTAGCAGATGTTGCGAATGGAAGATCTGCTCCTATGAATGAGGAACAAAGAAGAGAAGCTGAAAAGACCGTTGTTGGTGAATTTAGTGATGTCAAACATGTCCGGGGTATTCTTTCCATGGGAAGGCATGACGATCCAGATAGTGGTGGATCCTCTTTTTCAATGTTGCTGGGAAATTCTCCTCATCTTGATGGAAAGTATGCAATATTTGGAAAAGTTACTAAAGGCGACGATACATTGACAAAGCTTGAGCAACTACCTACCCGTAAAGAGGGAATATTTGTCATGCCAACGGAGCGCATCACTATCCTCTCATCATATTACTATGACACGGAGGCAGAAACTTGTGAGCAAGAAAGATCAGTTTTGAAGCGTAGATTAGCTGCATCAGCCATTGAAGTTGAAAGACAGAGAATGAAATGCTTCCCCTAA 663 0.4118 MLSLRFILLLAFASSISSFEPQMGSTRVVFQTNYGDIEFGFYPTVAPKTVDHIFKLVRLGGYNTNHFFRVDKGFVAQVADVANGRSAPMNEEQRREAEKTVVGEFSDVKHVRGILSMGRHDDPDSGGSSFSMLLGNSPHLDGKYAIFGKVTKGDDTLTKLEQLPTRKEGIFVMPTERITILSSYYYDTEAETCEQERSVLKRRLAASAIEVERQRMKCFP 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01827 220 Gene3D - 14 192 IPR029000 -
Mepo5g01827 220 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 29 185 IPR002130 GO:0000413|GO:0003755
Mepo5g01827 220 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 142 157 IPR002130 GO:0000413|GO:0003755
Mepo5g01827 220 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 67 79 IPR002130 GO:0000413|GO:0003755
Mepo5g01827 220 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 56 IPR002130 GO:0000413|GO:0003755
Mepo5g01827 220 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 128 IPR002130 GO:0000413|GO:0003755
Mepo5g01827 220 CDD cyclophilin 29 182 - -
Mepo5g01827 220 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 5 220 IPR044233 -
Mepo5g01827 220 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 28 182 IPR002130 GO:0000413|GO:0003755
Mepo5g01827 220 SUPERFAMILY Cyclophilin-like 21 187 IPR029000 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01827 28 183 U-box Gene Family AT5G67530 27.044 1.04e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01827 - - gmx:100819238 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01827 5 19869257 19876546 Mepo5g01827 5 19869257 19876546 ECH