Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01824 ATGCATGAGATGGCTTTCTTCCAAGCAAATTTCATGCTACAAACTCCTCATCACCATGATGATCATCATCAACCATCTTCACTGAACTCAATTCTACCTCAAGATTATCATGGGGGACCATCATTTCTAGGGAAGAGATCTATGTCATTTTCATCAGGAATTGAACTTGGAGAAGAAGCAAATATACCTGAGGAAGATTTATCTGATGATGGATCACAAGCTGGAGAGAAGAAGAGGAGGCTTAATATGGAACAAGTGAAGACACTTGAGAAGAGTTTTGAACTTGGTAATAAGCTTGAGCCTGAGAGGAAAATGCAGCTTGCAAGAGCACTTAACTTGCAACCTAGACAAGTTGCTATATGGTTTCAAAATAGAAGGGCTAGATGGAAGACAAAGCAGTTGGAAAAAGACTATGATGTTCTTAAAAGACAATATGATGCTATTAAGTTAGATAATGATGCACTTCAAGCTCAGAACCAAAAACTTCAAGCTGAGGTTTGTAGTTTTCTTTTTAACTCATAA 522 0.3755 MHEMAFFQANFMLQTPHHHDDHHQPSSLNSILPQDYHGGPSFLGKRSMSFSSGIELGEEANIPEEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALNLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQYDAIKLDNDALQAQNQKLQAEVCSFLFNS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01824 173 FunFam Homeobox-leucine zipper protein ATHB-13 69 136 - -
Mepo5g01824 173 SUPERFAMILY Homeodomain-like 68 134 IPR009057 -
Mepo5g01824 173 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 55 168 IPR045224 GO:0003700
Mepo5g01824 173 ProSiteProfiles 'Homeobox' domain profile. 72 132 IPR001356 GO:0003677
Mepo5g01824 173 SMART HOX_1 75 136 IPR001356 GO:0003677
Mepo5g01824 173 Pfam Homeobox associated leucine zipper 132 166 IPR003106 GO:0006355|GO:0043565
Mepo5g01824 173 Pfam Homeodomain 77 130 IPR001356 GO:0003677
Mepo5g01824 173 ProSitePatterns 'Homeobox' domain signature. 107 130 IPR017970 GO:0000981|GO:0006355
Mepo5g01824 173 MobiDBLite consensus disorder prediction 59 82 - -
Mepo5g01824 173 CDD homeodomain 77 133 IPR001356 GO:0003677
Mepo5g01824 173 MobiDBLite consensus disorder prediction 16 35 - -
Mepo5g01824 173 Coils Coil 124 165 - -
Mepo5g01824 173 Gene3D - 69 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01824 Mepo-Chr5 19781802 19783222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01824 4 166 Homeobox Transcription Factor Family AT1G69780 69.822 2.25e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mepo5g01824 Homeodomain 6.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01824 K09338 - gmx:100808033 270.781