Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01811 ATGCAGCACCCACCTTCCAATAGTAAGAGAGTCAAGCTGATGATCACCTATGGTGGAAACATCCAACCTAGGCTTACTTCTCTTCATGATCATCGTCGTTATTCCTACATCGGCGGCGACAACAAAATCATCACCATCCATCGTGATATCAACTTCTCCGACTTCATGGCAAAGCTTTCCACATTCATGTTTTCTGATGTTTGCCGCAAGTATCAACTCCTTGGTGAAGATTTCGATGCTTTGATCCCGGTTTATAACGAAGAAGATCTCAATCATATGATGTTCGAGTACGATCATATATGTTGCTTTTCACGACAGCCTGCAAGGTTGAGGGTCTTCCTCTTCCCTGTCCCTATTAACAATAACAAGGCATCTTCTGATTCTTTGGCTTCCACTATCAATCTCAAAAAGTTGTCCGTCGACTCGCTCAATACCGTTCATGTTCCTACTTTTGAAGATTCATCTCCTCCTACTACGCCTCCACCTCCGCCTGCAAAGTTTAAGACAAGTCTTGGAATTCTTGTCATTGAAGGTGAGGCATTGATTTTTTTACCAACCCTTAACAATAGAGCAGTAGAACCTGCTCACAATTCCAAACTGTTAATCATGAATGCCTTTTCATAG 624 0.4231 MQHPPSNSKRVKLMITYGGNIQPRLTSLHDHRRYSYIGGDNKIITIHRDINFSDFMAKLSTFMFSDVCRKYQLLGEDFDALIPVYNEEDLNHMMFEYDHICCFSRQPARLRVFLFPVPINNNKASSDSLASTINLKKLSVDSLNTVHVPTFEDSSPPTTPPPPPAKFKTSLGILVIEGEALIFLPTLNNRAVEPAHNSKLLIMNAFS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01811 207 CDD PB1_UP2 14 115 - -
Mepo5g01811 207 Gene3D - 35 116 - -
Mepo5g01811 207 Pfam PB1 domain 34 116 IPR000270 GO:0005515
Mepo5g01811 207 PANTHER OS05G0427100 PROTEIN-RELATED 6 160 - -
Mepo5g01811 207 SUPERFAMILY CAD & PB1 domains 31 118 - -
Mepo5g01811 207 SMART PB1_new 29 117 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01811 Mepo-Chr5 19569208 19570931 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01811 10 146 MAP Kinase Kinase Kinase AT5G57610 31.387 1.43e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01811 - - mtr:11424558 251.136