Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01810 ATGGTGAGGATCAGAGGAGGAAGAGAGCAGAGGAAAAGTGATGATGAGAAAAGTGTTGATGTTCCTGTATTGGTTCTTGGAACCAAGTCTTCGCCAGCTCTTTCTGACGCTCAAACTCCAAAACCTATGAATCATGTTGAGAATGTTTTTGTGCCTAGTGTTGGTCAGGTTGCTCCTAGAGCTCCTTCTGTTCAGAAATCAAACAGTTCTGGAAACTTCAATCCGAAGAATAAGATGCCGTCACCGCGTTATCGTAAGCCAGGCCCTAAGCGCAACAGAAACACAAATGGCACACCTCACTTTCCTGTGGCGACGATGCCTTATCCTAAAGGCGAGAATCCTAAGCCTGTATCGCAGGCAGCAGCAGGACAAGGTTTTACTCCACCTGCTCGTGCCATTGATGCCAAACATGTTCAGCCTCCGGTGCAAGGAGATCCGAATGCTTATGCTGTTAATTATCCAAGTGGAAGGCCAAATCCCCAAGAACAAGAAAGCATGGAAGGAAGAAAAAGTATACAATCATCCCTCCTTCAAATTGATTTAAATGGGCCGGCTTCAGTCCAAGATCCCTCTGAGCATATGCATAGCATGGAACAACAACAGGAGAAAACTGGCACCGATATCATTGAGTCGGGTCGTGCCGTTGCAATTCCAAACTCTAATGATAATAACGTCGCAACTCTAAACTCTGCAAAAAATAACTTAATTCAAGCTGAGTCAGTACCAGAAGAAAGTCATCCCCCAGGGAGAGTACAGAGGAAAAGCATACATTGGACAGATGATGAACACAAGTTGTTTTTGAAGGGGCTGAAAAAACATGGAAAGGGACACTGGAAAGATATTTCAAAAGATTTTGTGGTGACAAAATCTCCAACTCAAATTGCTAGCCATGCCCAAAAATACTTTATCCACCAAGATGTGAAAGATATAGAGAAGAAGGAGAAAAAGAGAAAAAGTATTCAAGACACAACCTTAAACAAGAATGACACATTGGTTACTGTCGCTGTTGAACAGCGAGATGAGATTCCTTCAGTTGAGCTACAAAGTGTGATTCCTCCTCAAGGAATGCAACAGACACAAACACAACAGAATGAGATTTCTCCTATGTTGTTGCATTGTCCAATCGGTTCTACAATTCCTTCGATTGAGCAACAAAATGAGCTTACTCCTTTAGTCACTGCTCCTATGAAACAACAACAAGAGACTCCTGCCATCTTAAACAACAAGGACAATGACAACTTGCAAACCCAACAAATGTATCAGTTGGCGTTGCTTTATCCAATCGGTTCTACACTTCCTGATATGAACAAACTTGAGAAGATGTGCAAGTTGTTGGCAAAAGAGCTTTGA 1350 0.4252 MVRIRGGREQRKSDDEKSVDVPVLVLGTKSSPALSDAQTPKPMNHVENVFVPSVGQVAPRAPSVQKSNSSGNFNPKNKMPSPRYRKPGPKRNRNTNGTPHFPVATMPYPKGENPKPVSQAAAGQGFTPPARAIDAKHVQPPVQGDPNAYAVNYPSGRPNPQEQESMEGRKSIQSSLLQIDLNGPASVQDPSEHMHSMEQQQEKTGTDIIESGRAVAIPNSNDNNVATLNSAKNNLIQAESVPEESHPPGRVQRKSIHWTDDEHKLFLKGLKKHGKGHWKDISKDFVVTKSPTQIASHAQKYFIHQDVKDIEKKEKKRKSIQDTTLNKNDTLVTVAVEQRDEIPSVELQSVIPPQGMQQTQTQQNEISPMLLHCPIGSTIPSIEQQNELTPLVTAPMKQQQETPAILNNKDNDNLQTQQMYQLALLYPIGSTLPDMNKLEKMCKLLAKEL 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01810 449 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 258 306 IPR017930 -
Mepo5g01810 449 MobiDBLite consensus disorder prediction 154 185 - -
Mepo5g01810 449 ProSiteProfiles Myb-like domain profile. 250 302 IPR001005 -
Mepo5g01810 449 MobiDBLite consensus disorder prediction 1 204 - -
Mepo5g01810 449 FunFam transcription factor MYB1R1 256 307 - -
Mepo5g01810 449 Pfam Myb-like DNA-binding domain 258 302 IPR001005 -
Mepo5g01810 449 MobiDBLite consensus disorder prediction 1 19 - -
Mepo5g01810 449 ProSiteProfiles SANT domain profile. 258 306 IPR017884 -
Mepo5g01810 449 Gene3D - 256 307 - -
Mepo5g01810 449 MobiDBLite consensus disorder prediction 60 77 - -
Mepo5g01810 449 PANTHER TRANSCRIPTION FACTOR KUA1 178 408 - -
Mepo5g01810 449 SUPERFAMILY Homeodomain-like 251 305 IPR009057 -
Mepo5g01810 449 SMART sant 254 304 IPR001005 -
Mepo5g01810 449 NCBIfam myb-like DNA-binding domain, SHAQKYF class 254 305 IPR006447 GO:0003677
Mepo5g01810 449 CDD SANT 258 302 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01810 Mepo-Chr5 19564977 19567635 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo5g01810 Myb_DNA-binding 2.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01810 - K18757 mtr:25495062 696.041