Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01806 ATGGGGAAAGGAAGAAGTCCTGGGAAATGGATCAGGAGCTTACTCTCAGGAGGGAAGAAATCTTCATCGAAGTCTAGTTCGTCAAAGAAGAATGATATTTTTAAATCTTCGAGTAACAAGGATGCACGGGGAACTTCTGAGTTAACTGTTTCTAATCCAATTTCAACTGTGGATTCTTTGCAAATATCTGCACCAATATCTGGAGCTAATGTTGCGAAAGCAGTGATTTCAGAAAAGGAAGTAGTTAACAAGTCATCTCATGAGAGGGATATTCTCTCAAATGGAAATGAAAAGGCTCAGGTACCGGCTGTTGCTAATGTTGCAACTCAAGATGATCTTGAGACACTCAGGCTTACGGAAGCAGCTATTAAACTTCAGGCTGGTTGTAGAGGCTATCAGGCTCGTCGGGAATTTCATACACTCAAAGCTGTTACACAGCTGCAAGCTCTTATCCGTGGTCACTTGGTTAGAAGACAAGCTGTTTCTGCTTTATATTGTGTGAAGGGAATTGTTAAAGTGCAAGCATTGGCTCGTGGTTACAATGTTAGACGTTCTGATATTGGGCTTGAGGTCCTGAAAATTCGCAAGGATACTCAATGTTCAAAATCTATTGGCATTGTTACATCTACACCAGCAGACAAGCTGTCAGAAAATGCCTTTGTTCGCCAGCTGCTGGCTTCATCGACCCATGCGTTTCCTCTATCTCTAAATAGCGATCTTGGAGAACCTTACTTGGCTTCGAAGTGGCTTGACCGTTGGACAACATCAAGCTTTTGGGCACCTCTTCCTAAATTGAAGAAGAAACTTGACTCAGTGTCGGCTGAAAAAGGACAAGTTAAAAGGACTACCCGGAAATTGCCTGCTGTGAAAGCTTCTGATGGCTCGAGTTCTGGTTCTAGCAACCAAAAACAACGTCCAAAAAAGGATTCAAATCACTCATTGGTTTCAGCTCAGGCACAAGAACTCCCAAAGAAAGAAATTGAGAAAAGTAGTCTAAAGAAAACTCGTATGCAGAATGTTTCAGACAGATCTGAGATTGTTAATGAGAAAAGAAAACACAGCTCTAGGGCAACTTCAGATCAAACTGTCACTGATGTTTCAGAGCAGGGGCCAGGTTCCTCTTCTGAGAAAATGAAAGAAACGACGGAGCCAAAGTCAGAAGAATCTTGCCCTGAGAAAGGTCTTGGACAGAAAGTACTGGAAGAGAATAATGAAAAGCCAAAGAAGAGCTCAAATGGTGGTGCCAAAGAAGAGAAAGGTCTTGGAAAGAAAACTCTAGAAGAGAAAAACGATAAGCCAAAGAAGAGCTTAAATGGCAGTACCAAAGAAGAAAAAAGTCTGGGACAGAAAACTCTAGAAGAGAACAACGATAAGCCAAAGAAGAGCTTAAATGGCAGTGTCAATGGAGAGAAAGATCTTGGACAGAAAACACAAGAAGAGAATACTGATAAGCTAAAGAAGAGCTTAAATGGCGGTGTCAAAGAAGAGAAAGGTCTTGGACAAAAAACACAAGAGAATAATGATAAGCCAAAGAAGAGCTTAAGTGGCGGTGCCAAAGAAGAGAAAGGTCTTGGACAGAAAGCGCAAGAAGAGAATAATGGTAAGCCAAAGAAGAGCTTAAATGGCAGTGTCAAAGAAGAGAAAGGGCTCAAACAGAAAGCACTAGAACAGGAAGGTCATAATGATCCTACTGCTGTCTTACAGACTAGTGTGAAGAAGGTAGGAGATGAAGAAATTGGAGTCAGCGAAGACTTGAATGGCGGTGACAAAATTATCAGCAACAATTACCAAAGAAGAGCTTCACTGCCTGCTAATTTTAATGATCAAGAAAATGAGATACACAATACTCCAAGTCCAAGAGTGCCGAGTTATATGGCTCCAACTGAATCAGCAAAAGCTAGACTAAGGGGACAAGGCTCCCCAAGATTTGCTACTGATATCATAGACAAAAACAGTTTAACCAGGAGGCATTCACTTTCATCTTCACTTAACAGCAAGTCAGGTTCATTTTCCCCAAGAGTAGAAAAGCTGATAACTTTGAGCGGAAGAGGAGTTGCGAGGACTGATAAATCTCTGTCATCTTCAAGGGACGGGACTGATAAGATGACTCAACCTCAGTGGAGAAGGTGA 2130 0.4169 MGKGRSPGKWIRSLLSGGKKSSSKSSSSKKNDIFKSSSNKDARGTSELTVSNPISTVDSLQISAPISGANVAKAVISEKEVVNKSSHERDILSNGNEKAQVPAVANVATQDDLETLRLTEAAIKLQAGCRGYQARREFHTLKAVTQLQALIRGHLVRRQAVSALYCVKGIVKVQALARGYNVRRSDIGLEVLKIRKDTQCSKSIGIVTSTPADKLSENAFVRQLLASSTHAFPLSLNSDLGEPYLASKWLDRWTTSSFWAPLPKLKKKLDSVSAEKGQVKRTTRKLPAVKASDGSSSGSSNQKQRPKKDSNHSLVSAQAQELPKKEIEKSSLKKTRMQNVSDRSEIVNEKRKHSSRATSDQTVTDVSEQGPGSSSEKMKETTEPKSEESCPEKGLGQKVLEENNEKPKKSSNGGAKEEKGLGKKTLEEKNDKPKKSLNGSTKEEKSLGQKTLEENNDKPKKSLNGSVNGEKDLGQKTQEENTDKLKKSLNGGVKEEKGLGQKTQENNDKPKKSLSGGAKEEKGLGQKAQEENNGKPKKSLNGSVKEEKGLKQKALEQEGHNDPTAVLQTSVKKVGDEEIGVSEDLNGGDKIISNNYQRRASLPANFNDQENEIHNTPSPRVPSYMAPTESAKARLRGQGSPRFATDIIDKNSLTRRHSLSSSLNSKSGSFSPRVEKLITLSGRGVARTDKSLSSSRDGTDKMTQPQWRR 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01806 709 SMART iq_5 140 161 IPR000048 GO:0005515
Mepo5g01806 709 SMART iq_5 117 139 IPR000048 GO:0005515
Mepo5g01806 709 MobiDBLite consensus disorder prediction 1 47 - -
Mepo5g01806 709 MobiDBLite consensus disorder prediction 654 674 - -
Mepo5g01806 709 Pfam Protein of unknown function (DUF4005) 608 680 IPR025064 -
Mepo5g01806 709 MobiDBLite consensus disorder prediction 270 567 - -
Mepo5g01806 709 MobiDBLite consensus disorder prediction 378 460 - -
Mepo5g01806 709 Pfam IQ calmodulin-binding motif 168 184 IPR000048 GO:0005515
Mepo5g01806 709 Pfam IQ calmodulin-binding motif 142 159 IPR000048 GO:0005515
Mepo5g01806 709 Pfam IQ calmodulin-binding motif 119 139 IPR000048 GO:0005515
Mepo5g01806 709 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Mepo5g01806 709 Gene3D - 115 165 - -
Mepo5g01806 709 MobiDBLite consensus disorder prediction 359 377 - -
Mepo5g01806 709 MobiDBLite consensus disorder prediction 605 623 - -
Mepo5g01806 709 ProSiteProfiles IQ motif profile. 168 193 IPR000048 GO:0005515
Mepo5g01806 709 MobiDBLite consensus disorder prediction 473 558 - -
Mepo5g01806 709 MobiDBLite consensus disorder prediction 605 709 - -
Mepo5g01806 709 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 116 184 IPR027417 -
Mepo5g01806 709 MobiDBLite consensus disorder prediction 686 709 - -
Mepo5g01806 709 PANTHER IQ-DOMAIN 5-RELATED 1 356 - -
Mepo5g01806 709 MobiDBLite consensus disorder prediction 322 358 - -
Mepo5g01806 709 MobiDBLite consensus disorder prediction 289 304 - -
Mepo5g01806 709 ProSiteProfiles IQ motif profile. 142 169 IPR000048 GO:0005515
Mepo5g01806 709 MobiDBLite consensus disorder prediction 16 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01806 Mepo-Chr5 19436780 19444084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01806 616 709 IQD Protein Family AT1G18840 45.361 9.48e-10 59.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01806 5 19436780 19444084 Mepo5g01806 5 19436780 19444084 ECH
Mepo5g01806 5 19436780 19444084 Mepo1g01281 1 12620989 12627918 ECH
Mepo5g01806 5 19436780 19444084 Mepo1g01281 1 12620989 12627918 PCT