Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01800 ATGAAGATGTTGCAATTGCAACCACCACAATCCTATACAACAACTACAAACCCATTTTCAGTCCCACCTCACTCTTTCATCAAAACTCCCAAAAAATCCATTCCTTTGCCTCGTGTGGGTCCCACTTTCTCCCCCACCCTCACTTGTCGCCAGCCTGAACTTATCCATCCCAAACCTTTCCCTCCACCTCAACGTCCTCAACCTTCTTCTTCTTCTTCTTCTACCTCTTCCTCTCCAGTGAGAGAATTACCAGCAAGGGTTTATGTTAATCGTTCAGTTTACAAAGGGAAAGCTGTGCTCACTGTGTCTCCTGTACTTCCAAAATTCACTTCATTGGATTCAGGGGCATTCAAGATATCTAAAGAAGGTTTGATGTTGCTACAGTTTGCTCCTTCTGCCGGTGTTCGCCAATATGATTGGAGCAGAAAGCAGGTATTTTCACTATCTGTGGATGAAATGGGAAATCTAATTAATCTTGGTGCAAGGGAGTCTTGTGAATTTTTTCATGATCCTTTTATTGGAAGAAGTGATGAAGGTAAAGTGAGAAAAGTTTTGAAGGTGGAGCCACTTCACGACGGTTCCGGTCACATGTTTAAACTAAGTGTTCAAAACAAGCTCAAGAACATCGACGAGAAAATATTTATCCCTGTCACAAAAGCGGAGTTTGCAGTTTTCAATTCACTTTTCAGTTTTATCATGCCATTCCTCTTAGGTTGGAACGCCTTTGGCGACTCCATAAAGCCAGTAGTAAATATTGCAAACCCAAGAAGAAGAGAATACTTTGAATGGAACAGATAG 798 0.4173 MKMLQLQPPQSYTTTTNPFSVPPHSFIKTPKKSIPLPRVGPTFSPTLTCRQPELIHPKPFPPPQRPQPSSSSSSTSSSPVRELPARVYVNRSVYKGKAVLTVSPVLPKFTSLDSGAFKISKEGLMLLQFAPSAGVRQYDWSRKQVFSLSVDEMGNLINLGARESCEFFHDPFIGRSDEGKVRKVLKVEPLHDGSGHMFKLSVQNKLKNIDEKIFIPVTKAEFAVFNSLFSFIMPFLLGWNAFGDSIKPVVNIANPRRREYFEWNR 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01800 265 Gene3D Transcriptional Coactivator Pc4; Chain A 80 254 IPR009044 GO:0003677|GO:0006355
Mepo5g01800 265 MobiDBLite consensus disorder prediction 1 23 - -
Mepo5g01800 265 SUPERFAMILY ssDNA-binding transcriptional regulator domain 86 265 IPR009044 GO:0003677|GO:0006355
Mepo5g01800 265 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 47 265 IPR013742 GO:0003697|GO:0006355|GO:0006952
Mepo5g01800 265 MobiDBLite consensus disorder prediction 1 81 - -
Mepo5g01800 265 Pfam Whirly transcription factor 93 227 IPR013742 GO:0003697|GO:0006355|GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01800 Mepo-Chr5 19397747 19402806 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01800 11 265 Whirly Transcription Factor Family AT1G14410 56.923 2.42e-96 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Mepo5g01800 Whirly 1.7e-57 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01800 K26559 - tcc:18610477 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01800 5 19397747 19402806 Mepo5g01800 5 19397747 19402806 ECH