Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01785 ATGGCAGGTGGCAAGCTTTTTGGTGGTTCTAATATGTCACTTTTGCTTCAAAATGAAAGACTCCCTTGTACTTCTGAAGTCCTTGAATCTCTTTGGGTTCATACCCCTGCTTCTTTTCAAGGTTCAAATTCAGTGGTTAATTTTGAGAATGGTGGTGGCAGCAACAGAGTGGTAACAGATAGACCCTTCTTTCAACAACTTGAAAAAGAAGAGAATTGTGGTGATGAAGATTATGAAGCATGCTACCATCAACAAGGAAAGAAAAGAAGGCTTTCAAGTGAACAAGTTCAATTTCTTGAAAAGAGTTTTGAGGTAGAAAACAAGCTTGAACCTGATAGGAAAGTTCAACTTGCAAAAGAGCTTGGTTTGCAACCAAGACAAGTTGCTATATGGTTCCAAAACAGAAGGGCAAGGTTCAAGACTAAACAACTTGAAAAAGATTATGGCACATTGAAAGCTAGCTTTGATAGTCTCAAAGATGATTATGATAATCTTCTTCAAGAGAATGACAAGTTAAAAGAAGAGGTGAATTCTCTCAAGAACAAATTGATCCCAAGAGATAAAGAGAAAGAGAATTCAGATGACAAATCATCACCAGAAGCAATCAATTCACCTCACAACAACAAAAATCCAATGGACATAATCTCAATTACAAATTCAGAAAATGGGTCCAAAGTGTCACTCCCTAATATGGTACTAAAATGTAAGCAAGAAGATGCCAACTCAGCTAAAAGTGATGTGCTTGATTCTGATAGCCCACATTGCAATGATGGGAACAATCTTTCTTCTTTCATAGAGCCTACAGATTCTTCACATGCTTTTGAACCTGATCATTCAGATTTCTCACAAGATGAAGAGGATAATGATAACTTGAGTCATAATCTTTTGACTCTTCCTTGCTTACCAAAAGTTGAAGATGTTTGCTATGATGACCAACATGAAAATTCTTGTAATTTTGGGTTCCCTGTTGAAGACCAAACCTTTTGTTTCTGGCCTTATTGA 1002 0.3673 MAGGKLFGGSNMSLLLQNERLPCTSEVLESLWVHTPASFQGSNSVVNFENGGGSNRVVTDRPFFQQLEKEENCGDEDYEACYHQQGKKRRLSSEQVQFLEKSFEVENKLEPDRKVQLAKELGLQPRQVAIWFQNRRARFKTKQLEKDYGTLKASFDSLKDDYDNLLQENDKLKEEVNSLKNKLIPRDKEKENSDDKSSPEAINSPHNNKNPMDIISITNSENGSKVSLPNMVLKCKQEDANSAKSDVLDSDSPHCNDGNNLSSFIEPTDSSHAFEPDHSDFSQDEEDNDNLSHNLLTLPCLPKVEDVCYDDQHENSCNFGFPVEDQTFCFWPY 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01785 333 MobiDBLite consensus disorder prediction 178 197 - -
Mepo5g01785 333 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 62 231 IPR045224 GO:0003700
Mepo5g01785 333 SMART HOX_1 85 146 IPR001356 GO:0003677
Mepo5g01785 333 Gene3D - 80 148 - -
Mepo5g01785 333 MobiDBLite consensus disorder prediction 178 222 - -
Mepo5g01785 333 FunFam homeobox-leucine zipper protein ATHB-6-like 90 136 - -
Mepo5g01785 333 CDD homeodomain 87 143 IPR001356 GO:0003677
Mepo5g01785 333 MobiDBLite consensus disorder prediction 244 289 - -
Mepo5g01785 333 MobiDBLite consensus disorder prediction 198 222 - -
Mepo5g01785 333 Coils Coil 155 182 - -
Mepo5g01785 333 Pfam Homeobox associated leucine zipper 142 183 IPR003106 GO:0006355|GO:0043565
Mepo5g01785 333 ProSiteProfiles 'Homeobox' domain profile. 82 142 IPR001356 GO:0003677
Mepo5g01785 333 MobiDBLite consensus disorder prediction 271 289 - -
Mepo5g01785 333 Pfam Homeodomain 87 140 IPR001356 GO:0003677
Mepo5g01785 333 ProSitePatterns 'Homeobox' domain signature. 117 140 IPR017970 GO:0000981|GO:0006355
Mepo5g01785 333 PRINTS Lambda-repressor HTH signature 122 138 IPR000047 GO:0003677
Mepo5g01785 333 PRINTS Lambda-repressor HTH signature 113 122 IPR000047 GO:0003677
Mepo5g01785 333 MobiDBLite consensus disorder prediction 246 269 - -
Mepo5g01785 333 SUPERFAMILY Homeodomain-like 76 144 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01785 Mepo-Chr5 19188694 19191090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01785 51 257 Homeobox Transcription Factor Family AT3G01470 43.981 2.43e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mepo5g01785 Homeodomain 5.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01785 K09338 - adu:107489132 425.246