Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01778 ATGAGTCGCAAGAGAGAGAATCCCTCCTTTTCCCGCCACGACTTCAAACGCCGTCGCCCACTTCCGCCGCCGCCGGAAGAAGATAAACCCACCAAGCGCCCAACACCGCCGTCTGCGGTGGTCATCATGGGTCTCCCTATAGACTGCTCCGTCCTCGATCTCAAGTCTCGATTTGAGATCTACGGCTCCATCTCCCGCATCCGTATCGACCGTGACGCCGTCGGTTACATCACTTACCGGACCAAAGACTCCGCAGACGCCGCCATCGCCGCCGGTCATGATCCTTCGTTTGGAGTCACCGTTAATACCAAAAAGGTTCAGGTATTATGGGCAACAGATCCTCTAGCAATGTGGAGGGAAGGAGTTGGTAAGAACAAGGATAATGTGTCTATGTCAAAGCTTGTGAGAGCTGAGGTACCTTTGAGGAGGCATGGAAGAGGTAATAGACTTGCTTCAGCTATAGGGAAAACCAAAAGTAGTGAGGATGGTTCTGGTAGCTCAGTTCTTGAAGTTCCTTTCAAGGGTAGAGAAATTGTTGCTTATGATGATATCTTGTAA 558 0.5072 MSRKRENPSFSRHDFKRRRPLPPPPEEDKPTKRPTPPSAVVIMGLPIDCSVLDLKSRFEIYGSISRIRIDRDAVGYITYRTKDSADAAIAAGHDPSFGVTVNTKKVQVLWATDPLAMWREGVGKNKDNVSMSKLVRAEVPLRRHGRGNRLASAIGKTKSSEDGSGSSVLEVPFKGREIVAYDDIL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01778 185 PANTHER GEO13361P1-RELATED 32 140 - -
Mepo5g01778 185 Gene3D - 1 115 IPR012677 -
Mepo5g01778 185 MobiDBLite consensus disorder prediction 1 33 - -
Mepo5g01778 185 MobiDBLite consensus disorder prediction 1 38 - -
Mepo5g01778 185 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 38 113 IPR000504 GO:0003723
Mepo5g01778 185 CDD RRM_SF 40 108 - -
Mepo5g01778 185 SUPERFAMILY RNA-binding domain, RBD 22 119 IPR035979 GO:0003676
Mepo5g01778 185 SMART rrm1_1 39 109 IPR000504 GO:0003723
Mepo5g01778 185 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 40 91 IPR000504 GO:0003723
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01778 1 185 Homeobox Transcription Factor Family AT1G27050 51.707 1.20e-61 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01778 - - gmx:106797175 284.263