Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01764 ATGGGTAATCACGATTACTACAAAACACTAAAGGTTAAGCGTGATGCAACCCTAGAAGATTTGAATGATTCATATAATAATTTAGTTATGAAATGGCACCCAGATAAGATTAACCAATACCCTTCAAGGAAACAAGAGTTTGAGGCAAAGTTTAAGAGAATTTCTGAGGCTTATGAAGTTCTTAGTGATCCTAAGAAGCGTCAGATCTATGATCGCAATGGTCAATATCCTGTGAATAGGGAAAATGGTGGTGGGAGTAATATGGAGGTTGATGAAGGTGTTGAGGTTGTTGAGAGTGATTTGGTATGTAGCCTTGAAGAGCTTTATAAGGGTTGTAAAAGGAAGGTGAAAGTTGTAAGGAATGTTCCTGATGATTCTGGGAAGTTGAAGCGTGAAGAAGAAATCTTGAAGATACATATTCAACCTGGTTGGAAGAAGGGCACAAAAATCACCTTTCCTGGGAAAGGAAACTATCTTCCAGGATCTGGACCATCTGATGTAATTTTTGTGGTGAATGAGAGACCACATCCTATATTCAAGAGGGAAGGAAAAGATTTGATAATGACCGAAAAGATATCACTTCTGGAAGCTCTTGTTGGTAAGACTCTCAACATAACAACCTTGGATGGTAGACATATCACCGTTGAATTGGATGATATTGTGACACCGGGATATGAAAAGGTGGTCTCTGATGAAGGTATGCCACTTTCAAAGGATCCAAGCAAGAGAGGAAATCTTAGAATAAAATTTAATGTTATGTATCCACCAAGTTTGACCTCACAACAAAAATATGATGTAAGAAGGATTTTGAATGATCCTGCTGATTACTAA 831 0.3779 MGNHDYYKTLKVKRDATLEDLNDSYNNLVMKWHPDKINQYPSRKQEFEAKFKRISEAYEVLSDPKKRQIYDRNGQYPVNRENGGGSNMEVDEGVEVVESDLVCSLEELYKGCKRKVKVVRNVPDDSGKLKREEEILKIHIQPGWKKGTKITFPGKGNYLPGSGPSDVIFVVNERPHPIFKREGKDLIMTEKISLLEALVGKTLNITTLDGRHITVELDDIVTPGYEKVVSDEGMPLSKDPSKRGNLRIKFNVMYPPSLTSQQKYDVRRILNDPADY 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01764 276 SUPERFAMILY Chaperone J-domain 2 87 IPR036869 -
Mepo5g01764 276 Gene3D DnaJ domain 1 91 IPR036869 -
Mepo5g01764 276 FunFam DnaJ subfamily B member 13 176 256 - -
Mepo5g01764 276 Gene3D - 95 174 - -
Mepo5g01764 276 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 270 - -
Mepo5g01764 276 CDD DnaJ 5 63 IPR001623 -
Mepo5g01764 276 ProSiteProfiles dnaJ domain profile. 5 74 IPR001623 -
Mepo5g01764 276 Pfam DnaJ C terminal domain 97 255 IPR002939 -
Mepo5g01764 276 Pfam DnaJ domain 5 71 IPR001623 -
Mepo5g01764 276 SMART dnaj_3 4 66 IPR001623 -
Mepo5g01764 276 Gene3D - 176 255 - -
Mepo5g01764 276 PRINTS DnaJ domain signature 46 66 IPR001623 -
Mepo5g01764 276 PRINTS DnaJ domain signature 25 40 IPR001623 -
Mepo5g01764 276 PRINTS DnaJ domain signature 7 25 IPR001623 -
Mepo5g01764 276 PRINTS DnaJ domain signature 66 85 IPR001623 -
Mepo5g01764 276 SUPERFAMILY HSP40/DnaJ peptide-binding domain 179 263 IPR008971 GO:0006457|GO:0051082
Mepo5g01764 276 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Mepo5g01764 276 CDD DnaJ_C 100 258 - -
Mepo5g01764 276 SUPERFAMILY HSP40/DnaJ peptide-binding domain 98 187 IPR008971 GO:0006457|GO:0051082
Mepo5g01764 276 FunFam Dnaj homolog subfamily b member 93 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01764 Mepo-Chr5 18925751 18928479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01764 6 71 C2H2 Transcription Factor Family AT1G74250 35.821 1.36e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01764 K09510 - gmx:100778440 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01764 5 18925751 18928479 Mepo5g01764 5 18925751 18928479 ECH