Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01759 ATGGAAGAATGTGCTCGACAAATGGTCGCACGCAACAATGAAGGACGTGACATATTAGAGATGAATATGTCGCTTCATGTTGACACAATATCAGAGATGAATATGTCGCGCGCAACAATGGTAGAAGAGGAAGAAGATGATTATATAAGTCCAGATGATAATGGCCAACAAGTCCAAGAAATTGTGGGTTTGTTGGAAAACTTAGAAAATAATTGTCCATCTCGTGACTTTGGAGAGCAGTGTTCAATTTGTTTGGAGGAGTTTTGTACTAAGTCGGAACTTGCTTATACAAAATGCTCACATGTCTTTCATAAAGAATGTATTGTTCCATGGATTCAGGAATGCGTCAACAATTCATCATCTTACTCTTGTCCATTGTGTAGAAGTCAAATAATATGA 399 0.3759 MEECARQMVARNNEGRDILEMNMSLHVDTISEMNMSRATMVEEEEDDYISPDDNGQQVQEIVGLLENLENNCPSRDFGEQCSICLEEFCTKSELAYTKCSHVFHKECIVPWIQECVNNSSSYSCPLCRSQII 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01759 132 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 52 129 - -
Mepo5g01759 132 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 59 132 IPR013083 -
Mepo5g01759 132 SMART ring_2 81 127 IPR001841 -
Mepo5g01759 132 Pfam Ring finger domain 80 128 IPR001841 -
Mepo5g01759 132 ProSiteProfiles Zinc finger RING-type profile. 81 128 IPR001841 -
Mepo5g01759 132 SUPERFAMILY RING/U-box 80 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01759 Mepo-Chr5 18872142 18872540 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01759 79 132 C3H Transcription Factor Family AT3G58720 42.593 8.09e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01759 - - mtr:11422631 267.314