Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01756 ATGGATCGGTCCTTCTTCAGCCTAAGTGCGAGTCCTGTCCGTCGACAAATCTTATATAATCCACAAGACATTACTTTTTTGAGAGGTTGCTTCTTGATTGATTTTAATTTCACTCACATAATTTCACCTCGAGAACATGATGCGACAAACAATTTGTCCGACTTTACAATTACAATCAACAAAGTCTTGGCGATTCCTATTGAAATCTTATGTAATTGTATGTATGCTGTACATAACACCGTCGTGTTCGACATCTTTTCTTTTCTGCCAACTAATATATTACATATGATTCTACCACATATGGAAGAATGTGCTCGACAAATGGTCGCACGCAACAATGAAGGACGTGACATATTAGAGATGAATATGTCACTTCATGTTGACACAATATCAGCGATGAATATGTCGCACACAGCAATGGTAGAAGAGGAAGAAGACGATTATATAAGTCCAGATGATAATGGCCAACAAGTCCAACAAATTGTAGGTTTGTTGGAAAACTTAGAAAATAATTGTCCTTCTCGTAACTTTGGAGAGCAGTGTTCAATTTGTTTGGAGGAGTTTTGTTCTACGTCGGAACTTGCTTATACAAAATGCTCACATGTCTTTCATAAAGAATGTATTGTTCCATGGATTCAGGAATGCGTCAACAATTCATCTTCTTACTCTTGTCCATTGTGTAGAAGTCAAATAATATGA 699 0.3677 MDRSFFSLSASPVRRQILYNPQDITFLRGCFLIDFNFTHIISPREHDATNNLSDFTITINKVLAIPIEILCNCMYAVHNTVVFDIFSFLPTNILHMILPHMEECARQMVARNNEGRDILEMNMSLHVDTISAMNMSHTAMVEEEEDDYISPDDNGQQVQQIVGLLENLENNCPSRNFGEQCSICLEEFCSTSELAYTKCSHVFHKECIVPWIQECVNNSSSYSCPLCRSQII 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01756 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 131 232 IPR013083 -
Mepo5g01756 232 ProSiteProfiles Zinc finger RING-type profile. 181 228 IPR001841 -
Mepo5g01756 232 SUPERFAMILY RING/U-box 180 231 - -
Mepo5g01756 232 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 135 229 - -
Mepo5g01756 232 SMART ring_2 181 227 IPR001841 -
Mepo5g01756 232 Pfam Ring finger domain 180 228 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01756 Mepo-Chr5 18861107 18861805 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01756 179 232 C3H Transcription Factor Family AT3G58720 40.741 2.03e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01756 - K22753 mtr:11422631 259.225