Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01732 ATGGATAAAGAAAAGGTTCATATTAACATTGTGGTTATTGGTCATGTCAACTCTGGGAAGTCAACCACCGCTGGTCATTTGTTCTACAAGCTTGGAGGCATTTCAAAGAAGGAAATGGACACACTTGAGAATAAAGCTGCTGAGTTAAACAAGGATTCATTCAAGTATGCGTGGGTTCTTGACAAACTCAAGGCTGAGCGCGAAAGAGGTATCACAATTGACAATTCTATGTTAAATTTTGAGACCACCAAGTACCGCTGCACTATCATCGATGCCCCCGGACACAGGGATTTCATTAAGAACATGATTACTGGGACATCCCAAGCTGATTGTGCTCTTCTTATCATTGATTCCACTCCTGATGGTTTTGGAGCCGGTATTTCCAACAATGGTCAGATCCGTGAACATGCTCTCCTTGCTTACTCTCTTGGTGTCAAGCAAATGATCTGCTGCTGCAACAAGATGGATGCCTTTGGCCCCCTATCCTTCAAGAGTAGGTATGAAGAAATTGTGATTCAACTTTCATCAATTTTGATGAAGGTTGGCTATAAACCAGACGAACTTCAATTTGTTCCCATCTCTGGTTTTGATGGAGATAACTTGATTGAGCCCTCTCCAAAACTTGATTGGTTCAAGGGTCCCACCCTTCTTGAAGCTCTTGACCGAATCAAAGAGCCTAGGAGGCTATCAGACAAGCCTCTCCGATTACCACTTCAGGGTGTCTACAAGATTGGAGGAATTGGAACTGTGGCTGCAGGATGTGTAAGGACTGGTGTCTTAAAACCAGGAATGGCGGTCACTTTTGCCCCAAATTGCCGGCAAGGTGAAGTGACGTCCGTGCAGATGGACCATGCAGATCTTTCCGAGGCCCTTCCTGGTGATAATGTGAGATTTGGTGTTAAGAATGTGTCTGATGCACATCTCAGCCGAGGCTATGTTGCCTCAAACTCCAAGCATGACCCAGCCAAGGAGGCCATTAACTTTACATCTAAAGTTATCATCATTAATCACCCTGGCCAGATTGAAAAGGGCTATACACCTGTTCTTAACTGCCACACCTCCTACATTGCTGTCAAGTTTGCTAAACTTCTTGCCAAGGTAGACAGGTTTTCTGGCGAGATAATTGAGAAGGAGCCCAAATTCTTGAAGAAAGGTGATGGTGGTATTATTCAGATGATTCCCACCAAGCCCATGGTGGTTGAGAGTTTTTCTGAATATCCTTCACTCGGCCGTTTTATTGTCAGAGATGTGCATCAAACTGTGGCTATTGGAATCATCTTGGTTGTGAACAAGAAGGATCCTGGTGAAAGAGATAAGCTTGATTTACTTTTCAGGAAGTTACATCGTCAAAATAAAAAGCTGATGGAAGAATGCAAAAGTGTAGCTACTGGGGGGATTAAGTGTAGGCTGAACTTTTTGTTGGAGCAAGGATTGATGAAGAACAGTGATGTATTTGAAACAATTAAGCTAGAGATTGAGAAGATGGCAAAATCAATGAAGGAACTCAAGGAGGAGAATCAATCCATGAAGAGAAAATCAGAGGAATCTGATACTGCGCATATGGAGTTGGTTGATGAGCAGGCTGAGAGCGTGAAGAAACCGCGGACAGAATAG 1614 0.4343 MDKEKVHINIVVIGHVNSGKSTTAGHLFYKLGGISKKEMDTLENKAAELNKDSFKYAWVLDKLKAERERGITIDNSMLNFETTKYRCTIIDAPGHRDFIKNMITGTSQADCALLIIDSTPDGFGAGISNNGQIREHALLAYSLGVKQMICCCNKMDAFGPLSFKSRYEEIVIQLSSILMKVGYKPDELQFVPISGFDGDNLIEPSPKLDWFKGPTLLEALDRIKEPRRLSDKPLRLPLQGVYKIGGIGTVAAGCVRTGVLKPGMAVTFAPNCRQGEVTSVQMDHADLSEALPGDNVRFGVKNVSDAHLSRGYVASNSKHDPAKEAINFTSKVIIINHPGQIEKGYTPVLNCHTSYIAVKFAKLLAKVDRFSGEIIEKEPKFLKKGDGGIIQMIPTKPMVVESFSEYPSLGRFIVRDVHQTVAIGIILVVNKKDPGERDKLDLLFRKLHRQNKKLMEECKSVATGGIKCRLNFLLEQGLMKNSDVFETIKLEIEKMAKSMKELKEENQSMKRKSEESDTAHMELVDEQAESVKKPRTE 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01732 537 FunFam Elongation factor 1-alpha 229 316 - -
Mepo5g01732 537 CDD EF1_alpha 9 226 - -
Mepo5g01732 537 FunFam Elongation factor 1-alpha 323 430 - -
Mepo5g01732 537 Pfam Elongation factor Tu C-terminal domain 322 429 IPR004160 -
Mepo5g01732 537 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 IPR031157 -
Mepo5g01732 537 Coils Coil 485 519 - -
Mepo5g01732 537 CDD EF1_alpha_II 230 320 - -
Mepo5g01732 537 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 230 IPR000795 GO:0003924|GO:0005525
Mepo5g01732 537 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 327 427 IPR009001 -
Mepo5g01732 537 FunFam Elongation factor 1-alpha 1 226 - -
Mepo5g01732 537 Gene3D Translation factors 230 316 - -
Mepo5g01732 537 PANTHER TRANSLATION FACTOR 4 433 - -
Mepo5g01732 537 PRINTS GTP-binding elongation factor signature 148 157 IPR000795 GO:0003924|GO:0005525
Mepo5g01732 537 PRINTS GTP-binding elongation factor signature 88 98 IPR000795 GO:0003924|GO:0005525
Mepo5g01732 537 PRINTS GTP-binding elongation factor signature 104 115 IPR000795 GO:0003924|GO:0005525
Mepo5g01732 537 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Mepo5g01732 537 PRINTS GTP-binding elongation factor signature 68 76 IPR000795 GO:0003924|GO:0005525
Mepo5g01732 537 NCBIfam translation elongation factor EF-1 subunit alpha 1 432 IPR004539 GO:0003746|GO:0005525|GO:0006414
Mepo5g01732 537 Pfam Myosin-like coiled-coil protein 475 531 IPR026183 GO:0019905
Mepo5g01732 537 Pfam Elongation factor Tu domain 2 248 312 IPR004161 GO:0005525
Mepo5g01732 537 CDD EF1_alpha_III 323 426 - -
Mepo5g01732 537 Gene3D Translation factors 323 430 - -
Mepo5g01732 537 Gene3D - 1 226 IPR027417 -
Mepo5g01732 537 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 249 IPR027417 -
Mepo5g01732 537 MobiDBLite consensus disorder prediction 501 537 - -
Mepo5g01732 537 SUPERFAMILY Translation proteins 231 322 IPR009000 -
Mepo5g01732 537 Pfam Elongation factor Tu GTP binding domain 6 222 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01732 Mepo-Chr5 18616168 18622281 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01732 1 434 Eukaryotic Initiation Factors Gene Family AT5G60390 72.581 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01732 K03231 - gmx:100801611 636.336