Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01727 ATGCCTCTCAACAGGCAGCAAACTCTGGTAAATGGAAACGGTAATATCGCTGCTGTCGGTCAAAATGTCCGAATTCATTGTGTCTGTTTCGGGGGTGACAATGCTGAACAACTTTGGAGCTCAAGGGTAGGACATCCTCCTGGAGCACGTCCGAAACATTTGGTTTTCAGAATCGGAGAAGGTACTGTCATTAGAGGATTAAATGATGCTGTCATGCAGATGCGAGTTGGGGAACGAGCTCGTTTCGAGTGCTCTTCTGATTTAGCTTTCGGTGCTGAGGGCCACAATCCTTGGAATATACCGCCCAACACTGACTTGGTACTTGAGGTTGAGCTCGTGGGTTTTGTTGGTTAA 354 0.4746 MPLNRQQTLVNGNGNIAAVGQNVRIHCVCFGGDNAEQLWSSRVGHPPGARPKHLVFRIGEGTVIRGLNDAVMQMRVGERARFECSSDLAFGAEGHNPWNIPPNTDLVLEVELVGFVG 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01727 117 Gene3D - 3 116 IPR046357 GO:0003755
Mepo5g01727 117 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 17 113 IPR001179 GO:0003755
Mepo5g01727 117 SUPERFAMILY FKBP-like 6 116 - -
Mepo5g01727 117 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 20 116 IPR001179 GO:0003755
Mepo5g01727 117 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 7 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01727 Mepo-Chr5 18578578 18580797 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01727 44 116 Calmodulin-binding Proteins AT5G48570 41.333 1.67e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01727 - K09571 rvl:131308652 87.0409