Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01714 ATGTCTTTGTCTCGCACGTGCTCACAGTGCGGCAACAACGGCCACAACTCGAGAACATGCAACGACGGTGGAGAAGAAAAAAGCATCATGATATTTGGTGTTCGTCTCACCGGTGGAAACAACCACCCTAACACCACCACCACCACCAACACCACCATCAACAACCCTTTCAGAAAAAGTGCTAGCATGACCAACCTCTCTCAATATGAACAACCACCTCCACAAGATTCCAACCCCGCCGATGCCGGTTATGTATCTGATGACATCGTTCATGCCTCTGGTCGATCCAGAGAACGCAAACGAGGTGTTCCTTGGACAGAGGAAGAACACAAGTTGTTCTTGTTGGGATTGCAACAGGTTGGTAAAGGTGATTGGAGAGGAATTTCTAGAAACTTTGTGAAAACTAGGACACCAACTCAGGTTGCAAGTCATGCTCAGAAGTATTTCCTCCGCCGTCATAACCAGAATCGCCGCCGCCGGAGATCCAGTCTCTTTGATATTACCACCGATACGGTGATGGAACCTTCAACTATAATGGAAGATGATCAATTTCAGCAGGAAACAGTGGTGCCACTACCGCCACCAACCCCTGCCACATATCCATCCTCGCATTATGGTGGCATCCCCGGGACACCTTTTCCGATGGGTCTTGGTCCGGTAGCATTGCCGGTGATGAGTGCTGAAAGAGTGGCCAAGCCAATTAGGCCAACACCAATGCTGCCTCCTTCTTCTAAGATGGCTAATCTGAACTTGAAAGACAAAGCTTCTTCTTCTTCTTCCATTGAGCCTTTTCCATTGTCATTGAAGCTGCAACCTTCGACTCCATCGGAAGATCATTCACCGGAAAGTAGCAGCCATTCGTCATCATCGGCTTCATCATCGACTTTTAAAACCATGGCAGCAGGGAAGTATAATGGTGGGGGTGGGGATAGCATTATCAGTGTTGCTTGA 951 0.4837 MSLSRTCSQCGNNGHNSRTCNDGGEEKSIMIFGVRLTGGNNHPNTTTTTNTTINNPFRKSASMTNLSQYEQPPPQDSNPADAGYVSDDIVHASGRSRERKRGVPWTEEEHKLFLLGLQQVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTDTVMEPSTIMEDDQFQQETVVPLPPPTPATYPSSHYGGIPGTPFPMGLGPVALPVMSAERVAKPIRPTPMLPPSSKMANLNLKDKASSSSSIEPFPLSLKLQPSTPSEDHSPESSSHSSSSASSSTFKTMAAGKYNGGGGDSIISVA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01714 316 MobiDBLite consensus disorder prediction 252 316 - -
Mepo5g01714 316 ProSiteProfiles SANT domain profile. 100 153 IPR017884 -
Mepo5g01714 316 SUPERFAMILY Homeodomain-like 99 152 IPR009057 -
Mepo5g01714 316 Gene3D - 103 154 - -
Mepo5g01714 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 153 IPR017930 -
Mepo5g01714 316 NCBIfam myb-like DNA-binding domain, SHAQKYF class 100 151 IPR006447 GO:0003677
Mepo5g01714 316 ProSiteProfiles Zinc finger CCHC-type profile. 7 20 IPR001878 GO:0003676|GO:0008270
Mepo5g01714 316 MobiDBLite consensus disorder prediction 1 19 - -
Mepo5g01714 316 MobiDBLite consensus disorder prediction 1 24 - -
Mepo5g01714 316 MobiDBLite consensus disorder prediction 252 300 - -
Mepo5g01714 316 MobiDBLite consensus disorder prediction 36 58 - -
Mepo5g01714 316 Pfam Myb-like DNA-binding domain 104 149 IPR001005 -
Mepo5g01714 316 ProSiteProfiles Myb-like domain profile. 97 149 IPR001005 -
Mepo5g01714 316 PANTHER TRANSCRIPTION FACTOR KUA1 5 286 - -
Mepo5g01714 316 CDD SANT 104 149 IPR001005 -
Mepo5g01714 316 SMART sant 101 151 IPR001005 -
Mepo5g01714 316 MobiDBLite consensus disorder prediction 38 58 - -
Mepo5g01714 316 FunFam transcription factor MYB1R1 103 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01714 Mepo-Chr5 18393743 18396172 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo5g01714 Myb_DNA-binding 5.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01714 - - tpra:123909419 469.159