Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01690 ATGGAGACAAACAGTGTTGTTTCTATTGATGTTGATTCTCAAGAGGTTCATGTTTTGGCTGTTGATGATAGTCTTGTTGATCGTAAAGTCATTGAAAGGTTGCTCAAAATTTCAGCTTGTAAAGTTACTGCAGTGGATAGTGGAATAAGGGCACTACAATTTCTGGGGTTGGTTGATGAGAAAGAGACTTCTGAATCTGATGCTTTTGTTCCGGGTTTAAAGGTGGATCTAGTAATTACAGATTATTGCATGCCAGGAATGACTGGTTATGAGTTGCTTAAGAAAATCAAGGAATCATCCACTTTTAGAGCAATTCCAGTAGTGATTATGTCTTCTGAAAATATCTTGCCACGCATTGACAGATGCTTGGAGGAAGGTGCAGAGGATTTTATAGTGAAACCAGTGAAATTATCTGACGTAAAACGTTTGAAGGGTTACATGACAACTAGGGAGGTTAGAGCGGGAGGCCAAGACAATGAAGTTATCGTTACCAATAGTGTTGGTAACGATAACGGTGATGACAGTGTAGGGATAGGGATCAACAACAAAAGGAAGTTAGAAGAAGCATCTGATCTATCATTATCTGAACCGTCCATTTCATCGTCAACACTTTCAACACCATCATCATCACCGTCACCTTCATCATCACCGTTGTCTTCACCCGACGTTCTTGATTCTCCGATCAGACGGCTTAAAATGACCGGCACTGAATGA 714 0.4048 METNSVVSIDVDSQEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLVDEKETSESDAFVPGLKVDLVITDYCMPGMTGYELLKKIKESSTFRAIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKGYMTTREVRAGGQDNEVIVTNSVGNDNGDDSVGIGINNKRKLEEASDLSLSEPSISSSTLSTPSSSPSPSSSPLSSPDVLDSPIRRLKMTGTE 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01690 237 ProSiteProfiles Response regulatory domain profile. 17 148 IPR001789 GO:0000160
Mepo5g01690 237 SMART REC_2 16 147 IPR001789 GO:0000160
Mepo5g01690 237 MobiDBLite consensus disorder prediction 193 222 - -
Mepo5g01690 237 Gene3D - 16 193 - -
Mepo5g01690 237 SUPERFAMILY CheY-like 16 142 IPR011006 -
Mepo5g01690 237 Pfam Response regulator receiver domain 18 140 IPR001789 GO:0000160
Mepo5g01690 237 CDD REC_typeA_ARR 18 143 - -
Mepo5g01690 237 PANTHER TWO-COMPONENT RESPONSE REGULATOR 16 182 IPR045279 GO:0009736
Mepo5g01690 237 MobiDBLite consensus disorder prediction 189 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01690 Mepo-Chr5 18067305 18069013 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01690 11 229 Response Regulator Gene Family AT1G59940 55.251 1.76e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo5g01690 Response_reg 1.5e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01690 K14492 - gmx:100787696 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01690 5 18067305 18069013 Mepo5g01690 5 18067305 18069013 ECH