Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01683 ATGGCGGAACCACCTCGTCCATCAAAGCGCCCTAAAATCACCAGGGGGGAGGATGATTATATGCCTGGAAACATTATAGAGATCGAGTTATATAACTTCATGACATTTGATTACCTAAAATGTAAACCTGGGCTGCGATTGAATCTTGTAATTGGTCCCAATAGTTCTGGAAAGAGTTCTCTTGTGTGTGCAATTGCTCTTGGCCTCTGCGGCGAGCCCCAGTTGCTTGGGCGAGCCACAAGTGTTGCAGAATTTGTGAAGTGGGGAGAAGAATCTGGCCACGTTAAGCTTACCTTAAGAGGGGAGCATAAAGAGGATCGCATTACAATTATGCGTAAAATCAATATCAGCAGCAAGTCCGAATGGTTTTTAAACGGAAATATTGTGTCCAAAAAGGATGTGGCTGAAACCATTCAGAGGGTCTGTGAGTTTGCAAAGTTAACCCCCGTGCAACTTCTGGAAGAGACCGAAAAGGCTGTTGGTGATCCACAGCTTCCTGAGCAACATCGTGCACTAATTGATAAAAGTCGTGCATTGAAGCATGTTGAACTCTCTCTCAAGAAAAATGAAGGAACATTAAATCAGTTGAAGCAACATAATGCTGAATTAGAGAAGGATGTTGAATGTGTTCGTCAAAGAGATGAACTTCATGCCAAGGAGGACCTTAGTACGACAGCACTGAATGAGCAAAAAAAACGACAGGCAATAATTAGGCGTATTGAACAAAAGAAAGTGATACTGAAATCGATGGAAGATCAGGATGATTTAGATACTGGGTTAGCGAAGCTTGTTGATCAGGCAACGAAATGTAACATTTTGCGATTCCATAATGCAATTAAAGTTAAGGATCTTCTTGTTGAAGCTGCATGTTACGGACGAAGTTATGTTGTACAAGGAATGGCTTTCCTTGAATTTGCTGCAAAGCTCAACCCTAAGCTAGCTCCTGTGGTGAGGGTTTCCGCCACTTGTAGTTACTATTCATTCCATATCACTGTCCAGGCCAATCTGAAGCAGCATGAAAATTTTGCCCGTCAAGCATCAGAGCACTTTAATAAATCTAAGAAAGAAGCTGAAGAATGTAAACAGAAGCTTACAAATTTATTAAACAATGCTAAATCAATTGCCCCTCTTACACCTGACCTACAGAAGGAATTTCTTGAGATGCCTACCACAATTGAGGAGTTGAAAGAAGCTATTCAAGATACAATTTCTCAAGCTAATTTAATCCTTTTTGTCAATCCTAACATAGTGGAAGAATATGAGGATCGTCAAAGAGAGGTTAGAGAGAAAGGGACTAGAGGTCCAAAATGGATTGGTGGGCCTATGCAGTTGTTGATGTACTGA 1344 0.4115 MAEPPRPSKRPKITRGEDDYMPGNIIEIELYNFMTFDYLKCKPGLRLNLVIGPNSSGKSSLVCAIALGLCGEPQLLGRATSVAEFVKWGEESGHVKLTLRGEHKEDRITIMRKINISSKSEWFLNGNIVSKKDVAETIQRVCEFAKLTPVQLLEETEKAVGDPQLPEQHRALIDKSRALKHVELSLKKNEGTLNQLKQHNAELEKDVECVRQRDELHAKEDLSTTALNEQKKRQAIIRRIEQKKVILKSMEDQDDLDTGLAKLVDQATKCNILRFHNAIKVKDLLVEAACYGRSYVVQGMAFLEFAAKLNPKLAPVVRVSATCSYYSFHITVQANLKQHENFARQASEHFNKSKKEAEECKQKLTNLLNNAKSIAPLTPDLQKEFLEMPTTIEELKEAIQDTISQANLILFVNPNIVEEYEDRQREVREKGTRGPKWIGGPMQLLMY 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01683 447 Coils Coil 186 213 - -
Mepo5g01683 447 Gene3D - 24 208 IPR027417 -
Mepo5g01683 447 Pfam AAA domain 28 227 IPR038729 GO:0006302|GO:0016887
Mepo5g01683 447 Coils Coil 343 374 - -
Mepo5g01683 447 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 218 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Mepo5g01683 447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 388 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01683 Mepo-Chr5 17998016 18008109 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01683 219 433 Structural Maintenance of Chromosomes family AT5G15920 39.535 7.78e-40 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01683 K22803 - gmx:100778678 361.688