Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01665 ATGGAAAAGGAAATGTGTGATATTTCTGTTGAGAAGAGGCTTAGGCTATTTGGTTTTGAGCTAAATCCAACAAAGAATAATAATGAAGGACTTGTCAAAGAGTCTAATGAAGGAGATGAAAGTGTGAATTCCTCTAACTCAATTTCATCTGGAGGAGAGAAAATTGTCCAAGAAAAAAATTCATCTAAAGACCAAGATGAGAGAAAATTTGAGTGTCAATATTGTTTCAAAGAATTTGCAAACTCCCAAGCATTAGGAGGCCATCAAAATGCACACAAGAAAGAAAGATTGAAGAAAAAAAGATTGCAACTTCAAGCTAGGAAAGCTAGCATAAACTATTACTTACAACCTTTTCAAAAAAATTATCATGGTTTTTCTTACCATGGTTCTGATACTCATTGGTTTTATGACCCTTCTTCTTATAATTCTGAATTCTCTTTGAGTGAAGAATCTCAAATTAGTTTCAAGTCAAAAAATGTTCATGATACCAATTCTAGTTGGTATTCTCTTCCTTCTCATGTTTCTCCTTCCCAACAAGATACTTGCATGTTTACTTTCTCCAATGATGATAAGCCTTTCATTTTGGACCCTTCTTCAAACCAAAGTCATAGTAAAGCTTTAGATCTTCAACTAGGTCTCAATTTACAGTCAAATACAGAAGAAGCTCTTTGA 672 0.3333 MEKEMCDISVEKRLRLFGFELNPTKNNNEGLVKESNEGDESVNSSNSISSGGEKIVQEKNSSKDQDERKFECQYCFKEFANSQALGGHQNAHKKERLKKKRLQLQARKASINYYLQPFQKNYHGFSYHGSDTHWFYDPSSYNSEFSLSEESQISFKSKNVHDTNSSWYSLPSHVSPSQQDTCMFTFSNDDKPFILDPSSNQSHSKALDLQLGLNLQSNTEEAL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01665 223 MobiDBLite consensus disorder prediction 22 56 - -
Mepo5g01665 223 FunFam zinc finger protein 5 44 123 - -
Mepo5g01665 223 ProSitePatterns Zinc finger C2H2 type domain signature. 72 92 IPR013087 -
Mepo5g01665 223 MobiDBLite consensus disorder prediction 22 62 - -
Mepo5g01665 223 SUPERFAMILY beta-beta-alpha zinc fingers 66 97 IPR036236 -
Mepo5g01665 223 Gene3D Classic Zinc Finger 43 121 - -
Mepo5g01665 223 PANTHER ZINC FINGER PROTEIN 5 10 216 IPR044299 GO:0010090
Mepo5g01665 223 ProSiteProfiles Zinc finger C2H2 type domain profile. 70 97 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01665 Mepo-Chr5 17775713 17776704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01665 9 178 C2H2 Transcription Factor Family AT1G68360 36.000 7.13e-18 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo5g01665 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01665 - - gmx:100527006 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01665 5 17775713 17776704 Mepo5g01665 5 17775713 17776704 ECH