Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01642 ATGTCGATTTCATACTCCAACTTCTTCACCGACTCCGACCTCTTATGCGGCGAGGAAACCTCCAGCATCTTATCCTCAGATTCGCCGACCGAAAGCTTATCCGATGTTGAATCGTATCCGCCGCCGGAGGATGAGTTCATCGCCGGATTAATCGAAGACGAACGTAAATTCGTCATCGGATTCGATTATTTCGCGAAGATGAAATCTAGCTCGTTCGATTCCGATGCTAGAGATGAATCCATTCGATGGATCCTAAAGGTGCAGGGTTATTATGGTTTTCAACCGATTACGGCGTATCTTGCCGTGAACTATATGGATCGGTTCTTGAATTCTCGGCGGTTGCCGCAAACAAATGGGTGGCCACTGCAACTTCTATCAGTTGCTTGCTTGTCTTTAGCTGCAAAGATGGAAGAAACTTTAGTCCCTTCTCTATTGGACCTTCAGGTAGAAGGTGTCAAATACGTGTTTGAAGCCATAACAATTAGAAGAATGGAGCTACTTGTTCTAAGTGTCTTGGATTGGAGGCTAAGATCGGTTACCCCATTTAGCTTCCTTAGTTTCTTTGCGTGCAAGTTAGATTCAACTTCAACTTTTACTGGGTTTCTCATTTCACGAGCTACACAGATTATTTTATCTAAAATCCAAGAGGCCAGCATTCTTGCATATTGGCCCTCATGCATTGCTGCCGCGGCTATACTCTATGCAGCTAACGAAATTCCTAATTGGTCTCTCGTTAAGCCCGAGCATGCCGAGTCGTGGTGCGAGGGGCTAAGAAAAGAGAAAATTATAGGGTGCTACGGGTTAATGCAAGAACTTGTGATTGACAATCACCAAAGGAAACCACCTAAAGTGTTGCCACAGATGCGAGTGACAATTCAGCCCCTTATGAGGTCATGTGTCTCGTCATCTTCCTCTTCTCCTTCCTCATCATCATCATCCTATAAAAGAAGGAAATTAAATAACTGTTTGTGGGTAGATGATGACAAAGGATCAAACTCCCAATGA 1005 0.4418 MSISYSNFFTDSDLLCGEETSSILSSDSPTESLSDVESYPPPEDEFIAGLIEDERKFVIGFDYFAKMKSSSFDSDARDESIRWILKVQGYYGFQPITAYLAVNYMDRFLNSRRLPQTNGWPLQLLSVACLSLAAKMEETLVPSLLDLQVEGVKYVFEAITIRRMELLVLSVLDWRLRSVTPFSFLSFFACKLDSTSTFTGFLISRATQIILSKIQEASILAYWPSCIAAAAILYAANEIPNWSLVKPEHAESWCEGLRKEKIIGCYGLMQELVIDNHQRKPPKVLPQMRVTIQPLMRSCVSSSSSSPSSSSSSYKRRKLNNCLWVDDDKGSNSQ 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01642 334 Pfam Cyclin, C-terminal domain 179 288 IPR004367 -
Mepo5g01642 334 SMART Cyclin_C_2 179 308 IPR004367 -
Mepo5g01642 334 FunFam D2/4-type cyclin 60 177 - -
Mepo5g01642 334 ProSitePatterns Cyclins signature. 77 108 IPR006671 -
Mepo5g01642 334 Gene3D - 60 177 - -
Mepo5g01642 334 SMART cyclin_7 82 170 IPR013763 -
Mepo5g01642 334 SUPERFAMILY Cyclin-like 39 176 IPR036915 -
Mepo5g01642 334 Pfam Cyclin, N-terminal domain 49 176 IPR006671 -
Mepo5g01642 334 SUPERFAMILY Cyclin-like 160 276 IPR036915 -
Mepo5g01642 334 Gene3D - 50 240 - -
Mepo5g01642 334 PANTHER CYCLINS 50 275 IPR039361 -
Mepo5g01642 334 CDD CYCLIN_AtCycD-like_rpt1 76 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01642 Mepo-Chr5 17507552 17511967 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01642 1 333 Core Cell Cycle Gene Families AT1G70210 57.771 2.85e-128 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01642 K18810 - gmx:100780369 488.804