Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01630 ATGGGAATTTGCTGGAGTTCGATTGGTGGTCAGATCTTACCTACTTCTAATCTTAGGGTCTTCACTTTTGCTGAATTGAAAACTGCTACCAGGAATTTCAGACTTGATAATCTCCTTGGAGAGGATGGTTCTGGTAAAGTCTATAGGGGTTGGCTTGAATCTTCCAGGAATGCTAGTGGAACTACTGTTGCCGTCAAAAAGTTGAACACCGAAGGCTACCAAGGCCTCGGGGAATGGCAGTCAGAAATACATTTTCTAGGACGGCTTTATCATCCTAACCTTGTTAAGCTGTTGGGATACTGTTATGAGGAAACAAAGCTTCTCCTTGTCTATGAATACATGCAGAAGGGCAGTTTGGAGAATCACCTCTTTGGAAGGGGTGCTGCTAATCAACCACTTCCTTGGGACCTCAGAATTAAGATAGCAATTGGTGCAGCTTGTGGCCTTTCCTTTTTGCATGCTTCCGATGGAGAAAAAATTATTTACAGAGATTTTAAGACATCCAATATATTGCTTGATGGGTCCTATAATGCAAAGCTATCAGATTTTGGACTTGCAAAGTTGGGAACAACAGTGATGGGAACGCCTGGTTATGCAGCTCCTGAATATATGCAAACAGGGCAGTGGCGGAGCCAGGATTATTCAAAAAAAATTTGCAACACATTTATCGGGGTTTACAAAAAAAATTGCAAGCAAATAATAAAAAAATCGAAAGAAATTGCCCAATTTATAGGAGTTTATATAAGAAATTCAGAGGGATTTACAAAAGAAATTGCAAAGAATTTGGGCCAGAGCCCGGGCGACTACCCGGGCCCGCCAGGTCTTGAAACCGCCCATGATGCAGGGCATCTATATTTAAAGAGTGACGTCTATGGGTTTGGAGTTATTTTGGTCGAGATACTCACAGGCCTACGAGCAATTGATCCCAACCGTCCAAGGGGCTTTCACTGTCTAACATACTGGATCAGACCGCACTTACAAGATAGAAGAAAATTGAAGAAGATTATGGATCCTCTATTGAAAGATAAGTATCCAATCAAAGCTGCACTTCCTATAGCTAAGCTTGCTACAAGATGCCTTGCACCTGAGCCCAAAATGCGTCCATCCATGAAGGATGTTTTGGAAATGTTGCAGAGAATTCAAGCTGCCACTAACAGAACCGTGGAGGTTAGGGGTGCAAATTAA 1185 0.4228 MGICWSSIGGQILPTSNLRVFTFAELKTATRNFRLDNLLGEDGSGKVYRGWLESSRNASGTTVAVKKLNTEGYQGLGEWQSEIHFLGRLYHPNLVKLLGYCYEETKLLLVYEYMQKGSLENHLFGRGAANQPLPWDLRIKIAIGAACGLSFLHASDGEKIIYRDFKTSNILLDGSYNAKLSDFGLAKLGTTVMGTPGYAAPEYMQTGQWRSQDYSKKICNTFIGVYKKNCKQIIKKSKEIAQFIGVYIRNSEGFTKEIAKNLGQSPGDYPGPPGLETAHDAGHLYLKSDVYGFGVILVEILTGLRAIDPNRPRGFHCLTYWIRPHLQDRRKLKKIMDPLLKDKYPIKAALPIAKLATRCLAPEPKMRPSMKDVLEMLQRIQAATNRTVEVRGAN 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01630 394 FunFam Serine/threonine-protein kinase BIK1 4 113 - -
Mepo5g01630 394 Pfam Protein tyrosine and serine/threonine kinase 282 377 IPR001245 GO:0004672|GO:0006468
Mepo5g01630 394 ProSiteProfiles Protein kinase domain profile. 33 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01630 394 Gene3D Phosphorylase Kinase; domain 1 17 113 - -
Mepo5g01630 394 PANTHER OS01G0588500 PROTEIN-RELATED 12 381 - -
Mepo5g01630 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Mepo5g01630 394 SUPERFAMILY Protein kinase-like (PK-like) 14 377 IPR011009 -
Mepo5g01630 394 Pfam Protein kinase domain 35 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01630 394 PIRSF ILK 35 218 - -
Mepo5g01630 394 PIRSF ILK 278 391 - -
Mepo5g01630 394 Gene3D Transferase(Phosphotransferase) domain 1 114 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01630 Mepo-Chr5 17330350 17332448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01630 282 390 Glycoside Hydrolase AT3G07070 36.697 5.93e-17 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo5g01630 Pkinase 9.9e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01630 - - mtr:11430234 369.392