Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01624 ATGCCATTCGGGTTGGTCTCCGCCTGGAACAAGCGCCGAAGAAGCAAGTCTCAAGATCATACAGATCCATGGATTTACAAACCTGCACAACTTTGGCAACTTGATGATAAAACGCCGCGTCCTACAAAGAAGTTGCATGGATCATCTGTTTACACACTCAGGGAGATGGAAGAGGCAACATGTTCATTCAGTGAGGAAAATTTGCTTGGAAAAGGAGGATTTGGCAAAGTCTACCGAGGCACTTTGCGATCAGGAGAGGTTGTCGCAATCAAGAAAATGGAGCTTCCAGCAATAAAAGAAGCAGAAGGGGAACGTGAATTTCGAGTCGAAGTTGACATTTTGAGCAGACTAAGCCACCCAAATCTTGTTTCTTTGATAGGATACTGTGCTGATGGAAAGCATAGATTCTTAGTATATGAATATATGATTAATGGGAACCTGCAAGATCATTTGAATGGAATTGGAGAAAGAAACATGGATTGGCCTCGAAGACTACAGGTGGCACTGGGAGCTGCAAAAGGACTTGCTTATCTCCATTCAAGTTCTGATGTTGGAATTCCTATTGTTCATCGAGATTTCAAATCGACCAACATTCTCATAGATGCCAACTTTGAAGCAAAGATATCTGATTTCGGGCTTGCCAAGTTAATGCCAGAAGGACAGGAGACACACGTGACTGCCAGAGTACTCGGCACATTTGGTTACTTTGATCCCGAGTATACATCGACAGGGAAACTCACTCTCCAAAGTGATGTTTATGCTTTTGGTGTAGTTCTTCTGGAGCTTTTGACCGGACGTCGAGCTGTAGATCTAAACCAGGGTCCTAATGATCAGAACCTTGTACTACAGGTGAGGCACATACTTAATGACCGCAAGAAGCTTTGTAAGGTGATTGATCCAGAGATGGCTCGAAGTTCTTACACCATTCAGTCTATAGTCATGTTTGCTAATCTGGCATCAAGATGTGTACGAACTGAAAGTAACGAGCGGCCTTCAATGGCAGATTGTGTAAAAGAGATCCAAATGATTATCTATACAAATTCAAAAGGCTTGGGAATGGTTATGCATAGCTTGAGATTGATCTAG 1086 0.4282 MPFGLVSAWNKRRRSKSQDHTDPWIYKPAQLWQLDDKTPRPTKKLHGSSVYTLREMEEATCSFSEENLLGKGGFGKVYRGTLRSGEVVAIKKMELPAIKEAEGEREFRVEVDILSRLSHPNLVSLIGYCADGKHRFLVYEYMINGNLQDHLNGIGERNMDWPRRLQVALGAAKGLAYLHSSSDVGIPIVHRDFKSTNILIDANFEAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHILNDRKKLCKVIDPEMARSSYTIQSIVMFANLASRCVRTESNERPSMADCVKEIQMIIYTNSKGLGMVMHSLRLI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01624 361 ProSiteProfiles Protein kinase domain profile. 63 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01624 361 Pfam Protein kinase domain 64 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01624 361 SUPERFAMILY Protein kinase-like (PK-like) 39 346 IPR011009 -
Mepo5g01624 361 Gene3D Phosphorylase Kinase; domain 1 33 141 - -
Mepo5g01624 361 MobiDBLite consensus disorder prediction 1 21 - -
Mepo5g01624 361 Gene3D Transferase(Phosphotransferase) domain 1 142 352 - -
Mepo5g01624 361 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Mepo5g01624 361 FunFam serine/threonine-protein kinase PBS1-like 32 141 - -
Mepo5g01624 361 PANTHER OS01G0750732 PROTEIN 41 345 - -
Mepo5g01624 361 PIRSF ILK 33 351 - -
Mepo5g01624 361 FunFam receptor-like serine/threonine-protein kinase NCRK 142 352 - -
Mepo5g01624 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Mepo5g01624 361 CDD STKc_IRAK 69 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01624 Mepo-Chr5 17274392 17277729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01624 46 340 Receptor kinase-like Gene Family AT3G58690 47.333 8.00e-92 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Mepo5g01624 Pkinase 9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01624 - - gmx:100796654 688.337