Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01581 ATGAACAATGGAGGTTCAATACATCCTTTGAGAAGTCCTTCAGAAGCAACACCACAAATGAGTGGTGGTCAAATTCTTTTTAGTTATGACCAGATTCTCGAAATTACTAATGGGTTTTCAAGTGAAAACGTGATAGGCGAAGGGGGTTTTGGGCGTGTTTACAAGGCTTTAATGCCCGATGGTAGAGTCGGAGCACTTAAGTTGTTGAAGGCCGGTAGTGGTCAAGGAGAGAGGGAATTCAGAGCAGAGGTTGATACTATTAGTCGTGTTCATCATCGACATTTGGTATCGTTGATTGGCTATTGTATATCTGAGCAACAAAGAGTCCTCATTTATGAGTTTGTTCCTAATGGGAATCTTGATCAACATTTGCATGAAAGTCAATGGAATGTTTTGGATTGGCCCAAGAGGATGAAGATAGCAATTGGTGCTGCAAGGGGTCTAGCATATCTGCACGAAGGCTGCAACCCAAAGATTATTCACAGAGATATTAAATCTTCGAATATACTTTTGGATGATTCTTATGAGGCACAAGTTGCTGACTTTGGACTTGCCAGACTAACTGACGATACGAATACTCATGTATCCACTAGGGTAATGGGTACATTTGGCTATATGGCTCCAGAGTATGCAACAAGTGGAAAACTAACGGATAGATCAGATGTTTTCTCATTTGGAGTTGTTCTTCTTGAACTTGTTACTGGAAGGAAACCTGTTGATCCAACCCAGCCTGTGGGAGATGAGAGTTTGGTTGAGTGGGCTCGTCCAATTCTCCTTCGTGCAATCGGAACAGGTGACTTTAGTGAACTAGCAGACCCAAGGCTTCAACGACAATATATTGACAGTGAAATGTTTAGAATGATCGAGGCAGCTGCAGCATGTATTCGCCATTCTGCCCCAAAACGACCCCGTATGGTTCAGATTGCAAGGGCCTTGGACAGTGGAGATCAACTATATGATCTATCAAATGGGGTGAAATTTGGTCAGAGCACAGTTTATGATTCTGGGCAATATAATGAAGACATTATGAGATTCAAAAGGATGGCTAATGGAAGTTTTACTGACTCTGAATTTGATATGTACAGCTCAGAATACAGTTCAAGAGAAACGTCTGGATCTGCCCTGGTGCAAAAATCTTGA 1140 0.4193 MNNGGSIHPLRSPSEATPQMSGGQILFSYDQILEITNGFSSENVIGEGGFGRVYKALMPDGRVGALKLLKAGSGQGEREFRAEVDTISRVHHRHLVSLIGYCISEQQRVLIYEFVPNGNLDQHLHESQWNVLDWPKRMKIAIGAARGLAYLHEGCNPKIIHRDIKSSNILLDDSYEAQVADFGLARLTDDTNTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELVTGRKPVDPTQPVGDESLVEWARPILLRAIGTGDFSELADPRLQRQYIDSEMFRMIEAAAACIRHSAPKRPRMVQIARALDSGDQLYDLSNGVKFGQSTVYDSGQYNEDIMRFKRMANGSFTDSEFDMYSSEYSSRETSGSALVQKS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01581 379 SMART serkin_6 39 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01581 379 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 12 114 - -
Mepo5g01581 379 SUPERFAMILY Protein kinase-like (PK-like) 18 312 IPR011009 -
Mepo5g01581 379 ProSiteProfiles Protein kinase domain profile. 39 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01581 379 Gene3D Phosphorylase Kinase; domain 1 10 114 - -
Mepo5g01581 379 CDD STKc_IRAK 45 313 - -
Mepo5g01581 379 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 23 354 IPR047117 -
Mepo5g01581 379 Pfam Protein tyrosine and serine/threonine kinase 42 309 IPR001245 GO:0004672|GO:0006468
Mepo5g01581 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Mepo5g01581 379 FunFam proline-rich receptor-like protein kinase PERK8 115 327 - -
Mepo5g01581 379 Gene3D Transferase(Phosphotransferase) domain 1 115 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01581 Mepo-Chr5 16750163 16757677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01581 20 370 Trihelix Transcription Factor Family AT1G70460 66.952 7.71e-178 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mepo5g01581 PK_Tyr_Ser-Thr 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01581 - - tpra:123908299 641.343