Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01571 ATGTCAACACTAAACCATCTTTTTGATCTTCCAGAACAGATATGCTATGTACAATGTGGATTCTGCAATACCATTTTAATGGTAAGTGTTCCATGCAGCAGTTTGACAATGGTGGTGACAGTAAGATGTGGTCACTGCACAAGTCTCTTATCTGTTAACATGATGAAAGCTTCTTTTGTCCCTTTCCACCTTTTAGCATCTCTAACTCATCTTGAGCAAAAAGAAAGTAGTAGTCCAGATGAAGATGCAAACAAGACTTTGAACAGTAATACTAGTGCATCCATGATGACTTATTCTGATTGTGAGGAAGATGATGTAATTCCAATCAGCAATGTTGTTAATAAACCACCAGAGAAGAGACAAAGAACACCATCAGCTTATAACCGCTTCATCAAAGAAGAGATTAAAAGGCTAAAGGCTAAAAACCCTGATATGGCTCACAAGGAAGCTTTTAGTACAGCTGCAAAAAATTGGGCTAATTGTCCCCCAACTCAGTGCAAAGGAGATGAAGAGAGCTGTAGCCAGACAGATCAATTTGTGGATCTTGACTCCCAAGTGGACCCCCATGAAGCTGAGGTGAATGAAGAAGAACAAGGATTCCGTGGAAGAAAGGTACCAAGAAATTCCATCTTGGAAAGGACACCATTTGAGTGA 654 0.3991 MSTLNHLFDLPEQICYVQCGFCNTILMVSVPCSSLTMVVTVRCGHCTSLLSVNMMKASFVPFHLLASLTHLEQKESSSPDEDANKTLNSNTSASMMTYSDCEEDDVIPISNVVNKPPEKRQRTPSAYNRFIKEEIKRLKAKNPDMAHKEAFSTAAKNWANCPPTQCKGDEESCSQTDQFVDLDSQVDPHEAEVNEEEQGFRGRKVPRNSILERTPFE 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01571 217 Pfam YABBY protein 11 165 IPR006780 GO:0007275
Mepo5g01571 217 PANTHER PROTEIN YABBY 6-RELATED 2 176 IPR006780 GO:0007275
Mepo5g01571 217 FunFam Axial regulator YABBY 4 109 176 - -
Mepo5g01571 217 MobiDBLite consensus disorder prediction 188 210 - -
Mepo5g01571 217 CDD HMG-box_SF 122 165 - -
Mepo5g01571 217 Gene3D High mobility group box domain 112 197 IPR036910 -
Mepo5g01571 217 MobiDBLite consensus disorder prediction 188 217 - -
Mepo5g01571 217 SUPERFAMILY HMG-box 111 164 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01571 Mepo-Chr5 16606141 16607871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01571 2 217 C2C2-YABBY Transcription Factor Family AT1G23420 55.947 1.01e-73 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mepo5g01571 YABBY 2e-63 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01571 K25796 - gmx:100804172 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01571 5 16606141 16607871 Mepo5g01571 5 16606141 16607871 ECH