Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01536 ATGCCTCCACTACTCACAAACACACATCACTATCATTACTTACTTCCTTCTTCAACCCCTCACCACCGTCATCACCACCGTCACCGCCACTGCTACCAACCTCTAATCACATTCTCCTCCGTCAACCGCCACCATTTCACCCTCTCCTCTTCCAAACGCATTCTCTTATCCCCTCCAATAAAATCAGCTTCCAGCAATGAAGTCTCAATCCACAACAATTCAGAATCAGCTTCTAATGCTTCTAACGAGTTTCTTGATAGAATACGAAAATGGGTTTCTTTCCTTCCCTCAATTTTTCCCGGAGGAACATGGTGGAACTTCTCCGATGACGTCGAGGTTTCCATGTTCAATCAACCCGTTACCGTTTGGTATGCTTTGGGTAAAATGTGGAACCTTGTGGCGAAAGATAGATGGGTTATTTTCGCTGCTTTTTCTGCTCTTATCATTGCAGCTGTTTCGGAGATTTCTATACCACATTTTTTGACAGCATCGATATTCTCGGCGCAAGGTGGTGATATTAAAGTTTTTCATGGGAATGTGCGTTTGTTGATTCTCATGTGTGTTGCTTCTGGAATTTGCAGTGGGATACGAGGTTGCTTTTTTGGCATTGCAAACATGATTCTGGTTAAGAGAATGAGAGAAACATTATACTCTTCCCTTCTTCTTCAGGATATATCGTTTTTTGACAATGAAACAGTAGGTGATTTGACAAGTAGACTTGGGGCAGATTGTCAGCAAGTTTCAAGGGTTATTGGAAATGATCTTAATTTGATACTGCGCAATGTCCTTCAGGGAGGAGGTTCATTGATCTACTTGTTGATTTTGTCTTGGCCACTTGGTTTATGTACGCTGGTGATATGCTCCATATTAGCAGCGGTCATGTTACGTTATGGATGGTACCAGAAGAAGGCAGCAAGGTTGATCCAAGAAGTCACTGCTTCTGCTAATAATGTAGCTCAAGAGACATTCTCTCTTATTAGAACTGTTCGAGTTTATGGAACCGAAGAAGAAGAACATGGAAGGTACAAATGGTGGCTTGAAAAATTAGCTGACATAAGCTTGCGACAAAGCGCTGCATATGGATTTTGGAATTTCAGCTTCAACACTCTTTATCATTCAACTCAGATTATTGCTGTGCTGTTTGGAGGAATGTCTATTCTATCGGGTCATATTACAGCAGAGAAACTTACTAAGTTTATACTATATAGTGAATGGTTAATTTATTCAACCTGGTGGGTGGGGGATAATGTATCCAATTTAATGCAATCAGTTGGAGCTAGTGAAAAGGTGTTCAACTTGATGGATCTCTCACCTAGCAGCCAATTTATAACAGAAGGAGTGAAGTTGCAGAGTTTAACGGGGCATATTGAGTTTGTAAATGTATCTTTTCACTATCCTTCAAGACCAACGGTACATGTAGTGCAACATGTAAACTTTGTTGTCAATCCTAGTGAGGTGGTTGCCATTGTTGGTCTTAGTGGTAGTGGGAAAAGCACTTTGGTGAATCTATTACTCCGTCTCTACGAGCCTACAAGCGGTCAGATTTTGATAGACGGTGTCCCTCACAAAGACTTGGATGTCATGTGGTGGAGAGAGAGGATCGGATATGTGGGACAGGAACCGAAGTTATTCCGGATGGATATTAGCTCCAACATCAGATATGGATGTACCCGCGATGTAAATCAGGAGGATATTGAATGGGCTGCGAAGCAAGCCTATGCTCATGACTTTATCTCAGCACTTCCTAGTGGTTATGAAACACTTGTTGATGACGATCTTTTAAGTGGCGGACAAAAGCAACGAATTGCCATCGCTAGGGCCATTCTTAGGGACCCGAAAATATTGATTCTTGATGAAGCCACCAGTGCACTGGATGCGGAAAGTGAACATAATGTGAAGGGTGTTCTTCGATCGGTTAGAAGCGATTCTTCATCAAGGAGAAGTGTCATAGTCATTGCACACAGGCTTTCTACCATACAAGCTGCTGACAGGATTATTGTGATGGATAAGGGTCAAATAGTTGAGAATGGAAGTCACAGGGAACTTCTCTTGAAAGACGGTCTATATGCTCGATTGACTAGAAAACAGGCTGATACCATGGAATGA 2106 0.4207 MPPLLTNTHHYHYLLPSSTPHHRHHHRHRHCYQPLITFSSVNRHHFTLSSSKRILLSPPIKSASSNEVSIHNNSESASNASNEFLDRIRKWVSFLPSIFPGGTWWNFSDDVEVSMFNQPVTVWYALGKMWNLVAKDRWVIFAAFSALIIAAVSEISIPHFLTASIFSAQGGDIKVFHGNVRLLILMCVASGICSGIRGCFFGIANMILVKRMRETLYSSLLLQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGGGSLIYLLILSWPLGLCTLVICSILAAVMLRYGWYQKKAARLIQEVTASANNVAQETFSLIRTVRVYGTEEEEHGRYKWWLEKLADISLRQSAAYGFWNFSFNTLYHSTQIIAVLFGGMSILSGHITAEKLTKFILYSEWLIYSTWWVGDNVSNLMQSVGASEKVFNLMDLSPSSQFITEGVKLQSLTGHIEFVNVSFHYPSRPTVHVVQHVNFVVNPSEVVAIVGLSGSGKSTLVNLLLRLYEPTSGQILIDGVPHKDLDVMWWRERIGYVGQEPKLFRMDISSNIRYGCTRDVNQEDIEWAAKQAYAHDFISALPSGYETLVDDDLLSGGQKQRIAIARAILRDPKILILDEATSALDAESEHNVKGVLRSVRSDSSSRRSVIVIAHRLSTIQAADRIIVMDKGQIVENGSHRELLLKDGLYARLTRKQADTME 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01536 701 SMART AAA_5 483 672 IPR003593 GO:0016887
Mepo5g01536 701 SUPERFAMILY ABC transporter transmembrane region 128 438 IPR036640 GO:0005524|GO:0016020
Mepo5g01536 701 PANTHER ABC TRANSPORTER B FAMILY 135 693 IPR039421 -
Mepo5g01536 701 FunFam Multidrug ABC transporter ATP-binding protein 448 700 - -
Mepo5g01536 701 Pfam ABC transporter 475 622 IPR003439 GO:0005524
Mepo5g01536 701 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 456 695 IPR003439 GO:0005524
Mepo5g01536 701 CDD ABC_6TM_TAP 143 430 - -
Mepo5g01536 701 ProSitePatterns ABC transporters family signature. 594 608 IPR017871 GO:0005524|GO:0016887
Mepo5g01536 701 Gene3D ABC transporter type 1, transmembrane domain 124 441 IPR036640 GO:0005524|GO:0016020
Mepo5g01536 701 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 448 696 IPR027417 -
Mepo5g01536 701 FunFam ABC transporter B family member 26, chloroplastic 122 441 - -
Mepo5g01536 701 Gene3D - 446 701 IPR027417 -
Mepo5g01536 701 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 141 422 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g01536 701 Pfam ABC transporter transmembrane region 142 407 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01536 Mepo-Chr5 16147026 16154224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01536 211 701 Calmodulin-binding Proteins AT2G36910 34.800 6.03e-73 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01536 - - gmx:100813359 1082.01