Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01533 ATGATCGGACTCTCCGAATCCGCTTCGGGTTCTCCCAAATCCACCATCAAATTCCTCTGTAGCTATGGTGGCAAAATCCTCCCCCGTTACCCCGATGGCAAACTCCGTTACCTCGGTGGCCATACTCGCGTTCTCTCTGTCGATCGCGCTATTCAATTTTCCGAACTGCTTTTGAAGCTGGAAGAGCTCTGCAGTTCATCCGTGACGCAACTTCGCTGTCAGTTACCCGCTGAAGACCTCGACGCTTTGGTTTCCATCACCTCCGACGAAGATCTCATCAACCTAATCGAAGAATATGATCGTACAGCGTCGCCACAATCACCGTTAAAGATCAAAGCCTTCATTTCTCCGCCTAGATCTTCAAACAAGGCTTCTAAACCTCCGTTACCGTCTCTTTCAAAATCAGCATCTGTCTCTTCATCATCCTCCGTGTCATCAACGTCGTCTTCATCATCGTATAGCAGCCTTACCGGTGGGAAGTATACAGCGGAGCCACCGGTGGTTTACCGCTGCGTTCATCATCATATGTCGCAGCAAAGTGTGAATCATGGAAACATGGAGAGATCTTCTGGGAGGAATGTTCCTCTGCCGCGCAGCGGTTACCAATCTCAGAGGAACACCGATCAAAATTATCTGATTCACAACGGCAACCACTGGCAATAA 663 0.4917 MIGLSESASGSPKSTIKFLCSYGGKILPRYPDGKLRYLGGHTRVLSVDRAIQFSELLLKLEELCSSSVTQLRCQLPAEDLDALVSITSDEDLINLIEEYDRTASPQSPLKIKAFISPPRSSNKASKPPLPSLSKSASVSSSSSVSSTSSSSSYSSLTGGKYTAEPPVVYRCVHHHMSQQSVNHGNMERSSGRNVPLPRSGYQSQRNTDQNYLIHNGNHWQ 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01533 220 SMART PB1_new 30 118 IPR000270 GO:0005515
Mepo5g01533 220 CDD PB1_UP2 19 115 - -
Mepo5g01533 220 MobiDBLite consensus disorder prediction 113 157 - -
Mepo5g01533 220 SUPERFAMILY CAD & PB1 domains 32 124 - -
Mepo5g01533 220 MobiDBLite consensus disorder prediction 178 220 - -
Mepo5g01533 220 Pfam PB1 domain 32 111 IPR000270 GO:0005515
Mepo5g01533 220 MobiDBLite consensus disorder prediction 195 220 - -
Mepo5g01533 220 MobiDBLite consensus disorder prediction 118 157 - -
Mepo5g01533 220 PANTHER OS05G0427100 PROTEIN-RELATED 7 192 - -
Mepo5g01533 220 Gene3D - 34 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01533 Mepo-Chr5 16115156 16117028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01533 16 115 MAP Kinase Kinase Kinase AT5G57610 49.000 7.93e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01533 - - psat:127119257 266.929