Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01528 ATGGAGGAAGCACTCAACCGTCTCAATGGAACACCTCCAACAATCCAAGAACCCGACACAAAAAAATCTACCAACAAAAGAACCACACGTGATAACACCGCATCCGCTGCTGGCGGAGGCGGTGCACTCCGCTACCGCGGAGTACGCCGCAGACCTTGGGGCCGCTATGCAGCTGAAATAAGAGACCCTCAGTCCAAAGAACGCCGCTGGCTTGGTACCTTCGACACTGCTGAAGAAGCTGCTCGTGCTTATGACTGTGCTGCACGTGCCATGCGTGGTCTCAAAGCTCGTACAAACTTTATTTACCCTACTTCTCCTCCTCCTAACACCACTTTTCCTTCTTTCAACTTCCCTAAACATTCTCAAGCTTTTGAAAAAACCTCTACACATAACCGCCACGTGGCTTCTTGTGGTTGGTCTGAACCACATGGTGTTGATTTTACTCACCAAAGAAACCCTTCAACTTCTTCACTTGACATGCTTCTGTTTCGTGAATTTATCAACTCTTCAAATTCCAACTCTTCTTTTGTTTCTTCTTCTGCTTATAATCACTTTCATGACAACTTTCCTTATTCTTACAACAAAAGTTGTACTAGTTCAGGTTCTGGTTTTGTTGCTGGTTGTTGTATGGCGAATTCTTGTGGAGGGGGTGCAAATAGCAATCATCACAACACTGGTGTAGATGGAAATAATGGTTCTAAAGTTTCTACTGATGAAGAATTTGAGTTTTTTCCTAAAGAATCATCTGATTCAGGGTTGTTGGAGGAGATTGTGAATAGGTTTTTGCCAAAACCTAAGCAAGAGATTAAGACAGAAATTTTGCCAAAGACAACTTTCTGCGACACTTTTGTTCCTTCTGCACCTGTGTTTGATCACACGTTTGGAAAAAGTGTTACCAAGAACGAATTTTCAGGTGTTGGGTTTGATCAAAATGGTTTCAATATGCAGCAGTTTGAGAATTTTAATAATGGGTATAATGGATCTTTTCAGTCTCTACCTCTTGGGAATGAACAAATAATGGTGAATCATGCTGAGAATTCTGTTATTCAGTATCAAGAGCTTCTTAATGCTTTTGCACTCAGGATGCAAAATGCTTAA 1098 0.418 MEEALNRLNGTPPTIQEPDTKKSTNKRTTRDNTASAAGGGGALRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAARAYDCAARAMRGLKARTNFIYPTSPPPNTTFPSFNFPKHSQAFEKTSTHNRHVASCGWSEPHGVDFTHQRNPSTSSLDMLLFREFINSSNSNSSFVSSSAYNHFHDNFPYSYNKSCTSSGSGFVAGCCMANSCGGGANSNHHNTGVDGNNGSKVSTDEEFEFFPKESSDSGLLEEIVNRFLPKPKQEIKTEILPKTTFCDTFVPSAPVFDHTFGKSVTKNEFSGVGFDQNGFNMQQFENFNNGYNGSFQSLPLGNEQIMVNHAENSVIQYQELLNAFALRMQNA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01528 365 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 27 197 - -
Mepo5g01528 365 Gene3D AP2/ERF domain 44 102 IPR036955 GO:0003700|GO:0006355
Mepo5g01528 365 SUPERFAMILY DNA-binding domain 44 101 IPR016177 GO:0003677
Mepo5g01528 365 ProSiteProfiles AP2/ERF domain profile. 44 101 IPR001471 GO:0003700|GO:0006355
Mepo5g01528 365 SMART rav1_2 44 107 IPR001471 GO:0003700|GO:0006355
Mepo5g01528 365 MobiDBLite consensus disorder prediction 1 45 - -
Mepo5g01528 365 CDD AP2 44 100 IPR001471 GO:0003700|GO:0006355
Mepo5g01528 365 PRINTS Ethylene responsive element binding protein signature 67 83 IPR001471 GO:0003700|GO:0006355
Mepo5g01528 365 PRINTS Ethylene responsive element binding protein signature 45 56 IPR001471 GO:0003700|GO:0006355
Mepo5g01528 365 FunFam Ethylene-responsive transcription factor 2 44 102 - -
Mepo5g01528 365 Pfam AP2 domain 44 93 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01528 Mepo-Chr5 16082352 16083678 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01528 1 277 AP2-EREBP Transcription Factor Family AT1G24590 36.789 5.64e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo5g01528 AP2 8.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01528 - - psat:127121366 469.159