Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01518 ATGGCTGAAAGCTTTGACAGTGCTGAATCTAATCTTTTATGTAGTGAAAACAATAGCACATGTTTTGATGATGTTGTTGTTGATGGTTCTGGAATCTCACCTTCTTGGGACCACACAAATGTTAACTTGGACAACGTTGGATCGGATTCATTTCTATGTTTTGTTGCGCAAAGTGAGGAAATTGTGAAGGTTATGGTTGAGAAAGAGAAGGATCATTTGCCTAGAGAGGATTATTTGATAAGATTGCGTAGTGGTGATTTGGATTTGAGTGTTAGAAGAGAGGCTCTTGATTGGATTTGGAAGGCTCATGCTTATTATGGATTTGGACCCTTGAGTCTTTGCCTATCTGTGAACTACTTGGATCGATTTCTATCGGTTTTTCAATTACCGAGAGGTGTGACTTGGACTGTGCAATTGTTAGCTGTAGCTTGCTTCTCACTTGCAGCTAAAATGGAAGAGGTTAAAGTGCCTCAATCTGTAGATTTACAGGTTGGAGAACCGAAATTTGTATTCCAAGCTAAAACAATTCAGAGAATGGAACTAATGATATTAAGCTCGTTACGATGGAAAATGCGGGCGATAACTCCTTGTTCCTTCATTGACTACTTCCTTGCTAAGATCAGTTGTGAGAAGTATTCCGAAAAGTCATTGATTGCAAGATCAGTTCAGCTCATCCTTAACATAATCAAGGGTATTGACTTCTTGGAATTCAGACCTTCTGAAATCGCTGCAGCGGTGGCTATTTCTTTAAAGGAACTGCCAGCACAAGAAGTTGATAAGGCCATAACTGATTTCTTCATTGTAGATAAGGAGAGAGTTCTAAAGTGTGTTGAATTGATAAACGATCTTTCCTTGATCAAGGTTGGTGGCAATAATTTTACACCATTTGTGCCTCAAAGCCCTATAGGGGTGCTTGATGCAGGGTGCATGAGTTTTAAGAGTGATGAATTAACAAATGGATCATGTCCAAATTCTTCACATAGTAGTCCAAATGCTAAAAGGATCAAATTTGATGGACCTTCAAGTGGAACTTCACAATGA 1041 0.39 MAESFDSAESNLLCSENNSTCFDDVVVDGSGISPSWDHTNVNLDNVGSDSFLCFVAQSEEIVKVMVEKEKDHLPREDYLIRLRSGDLDLSVRREALDWIWKAHAYYGFGPLSLCLSVNYLDRFLSVFQLPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFVFQAKTIQRMELMILSSLRWKMRAITPCSFIDYFLAKISCEKYSEKSLIARSVQLILNIIKGIDFLEFRPSEIAAAVAISLKELPAQEVDKAITDFFIVDKERVLKCVELINDLSLIKVGGNNFTPFVPQSPIGVLDAGCMSFKSDELTNGSCPNSSHSSPNAKRIKFDGPSSGTSQ 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01518 346 SUPERFAMILY Cyclin-like 49 191 IPR036915 -
Mepo5g01518 346 Gene3D - 64 279 - -
Mepo5g01518 346 PANTHER CYCLINS 54 282 IPR039361 -
Mepo5g01518 346 Pfam Cyclin, N-terminal domain 60 191 IPR006671 -
Mepo5g01518 346 CDD CYCLIN_AtCycD-like_rpt2 194 280 - -
Mepo5g01518 346 SMART cyclin_7 97 185 IPR013763 -
Mepo5g01518 346 SMART Cyclin_C_2 194 316 IPR004367 -
Mepo5g01518 346 CDD CYCLIN_AtCycD-like_rpt1 91 189 - -
Mepo5g01518 346 FunFam D2/4-type cyclin 75 187 - -
Mepo5g01518 346 Gene3D - 75 192 - -
Mepo5g01518 346 Pfam Cyclin, C-terminal domain 194 284 IPR004367 -
Mepo5g01518 346 ProSitePatterns Cyclins signature. 92 123 IPR006671 -
Mepo5g01518 346 MobiDBLite consensus disorder prediction 319 346 - -
Mepo5g01518 346 FunFam D6-type cyclin 188 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01518 Mepo-Chr5 15856879 15859486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01518 1 250 Core Cell Cycle Gene Families AT5G65420 55.159 4.82e-91 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01518 K18810 - gmx:100794010 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01518 5 15856879 15859486 Mepo1g02445 1 25496944 25499397 PCT