Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01489 ATGGCTCTTCCTGGTTCCCTGCAATTGTCTCATGGGCTGGGACTTTGCAGGAACCTCAACAGTAATAAAGACCGGAGGGTAAAGGGGAGATGCAAGATGCAGTTATTCAATGCATGCCCTTCCTATCCAGTTTCGTTTATTAAACATGACTACAGGGGCCTTCAACACCTCCGTCATATAAACAGGTCAACACATAGATTGTCTCGCAAATCACACTCTTTTAAATGTCATTGTTTTATAGTGCCAGGCGAACGAATTGCACTTCCTTCTGTTAAGGTGGCTACTACAGTACTGACAAGGTGCTGTAATGTGTTACAGAATAGTCCAGTCATTGTAAAGTTAATTCCCGCCGTTGGCATTATCATTTTTGCAGTATGGGGTGTTGGCCCATTAATGTTTCAGACAAGGAAACATTTTTTTCAGAAGAGTGATAATAGTTGGAAAAAAAGTACCACTCATTACATAGTAACCTCATATCTTCGACCACTACTGTTGTGGACTGGAGCCGTACTTATTTGCAGAGCATTTGAGCCAGTAATTCTTCCTTCAGAAACTAGCCAGGCTGTTAAGGAACGGCTTTTGAATTTTGTTAAATCGTTGTCGACTGTAGTGGCTTTTGCCTATTGTCTATCAAGTGTAATTCAACAAGCTCAGAAAATTGTAACAGAGAATGTAGATGCAAGCGAGACAAGAAATATGGGATTCCAATTTGCAGGCAAAGCTGTTTATTCTGCAGTATGGATTGCTGCTTTTTCATTGTTTATGGAATTGCTGGGCTTTTCTACCCAGAAATGGGTCACAGCAGGAGGTTTTGGGACAGTTTTGTTGACTCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCTAGCGCGATGATTCACGCAACTCGGCCTTTTGTGGTAAATGAATGGATTCAAACGAAGATTGAAGGATATGAGGTGTCTGGAACTGTTGAGCATGTTGGCTGGTGGTCACCAACAATCATACGAGGCGAAGATCGTGAAGCTGTACACATTCCAAACCACAAATTTACAGTGAATGTTGTGCGGAACCTCACTCAAAAAACACATTGGAGAATCAAAACCCACCTAGCCATTAGTCATTTGGATGTAAATAAGATTAATGTGAGAAATTATTTTGTTGTTTATATTGAAATTACTTTTCACCAATATTGTTTCATGATATTTTTTCCAATGACAAATGGTTTAATGCTTCTGCAGAACATTGTTGCTGACATGCGGAAAGTATTAGCCAAAAATCCTCAAGTTGAGCAGCAGAGATTGCACAGGAGAGTGTTTTTAGACAACATAAACCCTGAAAATCAGGCGCTTATGATTCTGATTTCGTGTTTTGTCAAGACCTCACATTTTGAAGAATATTTGTGTGTTAAGGAAACTTTACTATTGGATCTTCTTAGAGTTATCAGCCATCACCGGGCCCGGCTTGCAACACCAGTCCGTACCCTGCAGAAAATATATGCTGATGCCGACTTGGACAACATACCATACGCAGATTCCACATTTAATGGTGCTGGACCAGTTTCTAACCGTCCATTATTAGTGATTGATTCACCTTACAAGAACAATGCAGATGATAAAACGAAAAGTCGATCGGCACATGCAACTGTTGATCAAGATGACAAGACAACTGTGCGGACTAAACTCGATACCAAGACAGACGATAAGGTTAAACCAATCGGAGCAGCAGATGCTAAGGTTAGAGGAACTCAAGATGACTCTGAGGTGGATGCCAAAGTCATGGCATCTAACTCCGATGTGGGTGAAAACAAGCCACTGAAATCAAATTTAAACAAGGCAAACGTGGAGGTGCCGGAAATGTCATCTACTTCTAACTCCAAAGTAACTGGTTTGGAAGTAGATAATTCAACCATGAAGGACATCCATGTCAAACAATCAAAGGGTCAAACAGTTAAAAACACCAAGCCGAACGTCGACTCAGACAATCTTGTTTCCTCGTCAACAAACAGCACCGACAAAGCCAATGGAAATATGCCAACAAAACAGCAAGGAGAAAGGAAACCTGCTGCACCCAGGCCTGTTCTTGAAGAGAATATAGTTCTAGGTGTTGCATTGGATGGATCAAAGAGAACACTTCCTATCAATGATGAGATTGACACTGTGACAACTCAAGAGGCAAAGGAAATGGCTGCATCCCAGGGTGGAAATGGATCTCCAAAGGCTTCAGATGGGAATGTGAAGTAA 2223 0.4121 MALPGSLQLSHGLGLCRNLNSNKDRRVKGRCKMQLFNACPSYPVSFIKHDYRGLQHLRHINRSTHRLSRKSHSFKCHCFIVPGERIALPSVKVATTVLTRCCNVLQNSPVIVKLIPAVGIIIFAVWGVGPLMFQTRKHFFQKSDNSWKKSTTHYIVTSYLRPLLLWTGAVLICRAFEPVILPSETSQAVKERLLNFVKSLSTVVAFAYCLSSVIQQAQKIVTENVDASETRNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQKWVTAGGFGTVLLTLAGREIFTNFLSSAMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLTQKTHWRIKTHLAISHLDVNKINVRNYFVVYIEITFHQYCFMIFFPMTNGLMLLQNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALMILISCFVKTSHFEEYLCVKETLLLDLLRVISHHRARLATPVRTLQKIYADADLDNIPYADSTFNGAGPVSNRPLLVIDSPYKNNADDKTKSRSAHATVDQDDKTTVRTKLDTKTDDKVKPIGAADAKVRGTQDDSEVDAKVMASNSDVGENKPLKSNLNKANVEVPEMSSTSNSKVTGLEVDNSTMKDIHVKQSKGQTVKNTKPNVDSDNLVSSSTNSTDKANGNMPTKQQGERKPAAPRPVLEENIVLGVALDGSKRTLPINDEIDTVTTQEAKEMAASQGGNGSPKASDGNVK 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01489 740 MobiDBLite consensus disorder prediction 528 548 - -
Mepo5g01489 740 MobiDBLite consensus disorder prediction 635 675 - -
Mepo5g01489 740 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
Mepo5g01489 740 Gene3D - 195 297 - -
Mepo5g01489 740 Gene3D - 299 354 IPR023408 -
Mepo5g01489 740 MobiDBLite consensus disorder prediction 609 626 - -
Mepo5g01489 740 Pfam Mechanosensitive ion channel 240 366 IPR006685 GO:0016020|GO:0055085
Mepo5g01489 740 MobiDBLite consensus disorder prediction 526 548 - -
Mepo5g01489 740 MobiDBLite consensus disorder prediction 609 740 - -
Mepo5g01489 740 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 375 IPR045042 -
Mepo5g01489 740 MobiDBLite consensus disorder prediction 708 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01489 Mepo-Chr5 15588719 15596974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01489 9 740 Mechanosensitive Ion Channel Family AT5G10490 51.282 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01489 K22047 - gmx:100789444 1065.83