Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01480 ATGGATGCAACACAAACAGAGAAAATCTATGTTGCTGTTGGTGATGATGCACAAGATGGATTTAATACTTTAAATTGGGCTCTCAAGAAATGGAAATCTCATCCAATTTCCGTTGTTATTCTCCATGTGACTCATAACATTTCTAAGGATTATGTCTATACACCATTTGGGAAACTTCCTGCAAGATCTTTGAATGATGAGAAGCTAGAAGCTTTAAGGAAAGATGAGAAAGAGAGAATCAAGAAGTTGTTTTCTAAATATATTGCTTTCTGTGGCAAGGTGTCAGCAGAAATTCTTGAAGTTGAGAAATTTGACGAACCTATGCAAAAACGTGTAATAGACTTGATAAGTGGACTAGGAATTACCAAACTAGTCATGGGATTTTCATTCATGAAGCCTTCTTTGAAATCAAAAGGTGCTATTAGTGGCTTGTTCTATGTTCATCAACACAAACCTAGTTTATGTGAATTATTTATTGTATGTGGTGGCAAACAAGTTTTTCTAAGGGGAAACAATGATGAGAAAATCATGGAGGATGATAGTGGAGTCATGGTTGCTAAAATGAGAGATAAGGTAACGTTTAAAGATTGGCTAGACAAAATGTTCAGTGACAAAACAAATGATTATTCTCAGAATAGATTAAGTGCATCTCCTTCATCAACCAATTTGGTTCAAAATCAATGGGAGTTTTATCTTCAAGACATAGAAAATTATTATCAAGAGTTGCTATCTTCAAATTTGGAGGAAGGAAGCTACGTGCAGGAAAATGATGGCTCGCACGTTTGCCCAAAAATTCAACTACACGTCACTGAATTGAACAATTCTAATAAGAGTACTGTAGAAAAAATTGAGATGCTAAAAAATAAGCTAAATGAAGCTCGCAAAACCATTGAGTTGAAGAAGAAAGAGGCTAAGGAAAATATTGAGAGACGCACAAAAGCTGAATGGGCAATTAGCTTATGCAACAGCAGGGCTGAAGAAATTGAAGGTAGAATAAGGGAAGAAGTGAGTACAAAGGAGAACCTAAACAAGGAATTACATTTGGAGAAAGAGCAAAGAGAAGAAATGAGAACAGAGATTAAAGAGAAAAAACAAAGGATGAGTTCATTGGTAGAGCTTCAATCAGAACTATCAAACAAGCTTCAATTGTCGACAATGGCAAGATCAAGAGCAGAGACACAAGTAGAGAGAGCAGTGAGGGAGAGAACCGAAATGGTGAGAGAGATAGAGGAGTTAAGGAAGCAAAGAGATGTGTTGAATAGAAGGATTGAGTTTTGCAAGCAGAAGGATGCCATAGGCATGGCTGCGAGGCTGAGTGACAACATCACGAGTATTGGAATGAGGGAGTACAGTGAGGAGGAGCTCAGGTTGGCGACTGATAACTTCTCGGAGCGGTTGAGGTTGAAGTCTGGTAGGGATTGGACTAATGTGTATAGAGGACGGTTCAATCATTCCACTGTTGCAATTAAGATGATGTCTTCTTTTCATTCTTTGTCTCAAGAGGAGTTCCAATCCAAGGTGAGGTTTCTTGGTGACATTAGGCAACCACATGTAGTTGCCATGGTAGGCTTCTGCTCCAAGCCAAAATGCATAATTTTGGAATACATGGGCAATGGGAGTTTACAAGACATGTTGTTTTCTAGGAGAAGAAACCGGGGCTTACGGTGGCACGATCGAATACGAATAGCGACCGAAGTTTGCTCGGGCCTGGGCTTTCTTAATTCATCTTCGCAGAGGCCCATTGTTCATTGTCATTTGAGCCCGTCCCACATCCTCCTAGACCGAAATTTAGTTGCAAAAATCACAGGCTTTGGGCTTCAAGAGTGTGATGACAAGGACTGCAACGTTGAATCAGATTTACGAGCCGGAGGGGTTTTACTGATGCAGCTTTTGACCGGAAGAAATTGGGCCGAGCCCGTTGATGAGCCCATGACTGTGGGTATGGATAGAGAGACTTTGGTTAACATTCTTGATGACATGGCTGGACAATGGCCATTGGATCTTGCAAAAGAACTTTTGGGCCTGGCTATGATTTGCTTGTCTGTGAAAAACAAGCCCAACCCAAATCTAAGCATTGCAAGGGTCTTAGAGGAGCTCAATAAGATAAGAAGAAAGGGTGATGAAATAGTTGCAAAGGAAGATAGAAAGGTAATTATTGGTGGAAGCATAGATAGAGAGGGCTCTAGTGATGTGCCTAGTGTTTTCCTTTGCCCTATTCTTCAGGAGGTAATGAAAAATCCACACGTGGCAGCAGATGGATTTTCTTATGAACTGGAAGCAATAGAACAGTGGTTGCATTCAGGGCATGATACATCACCCATGACAAATTTAAGGCTGAAGCACACATCCCTTACACCAAATCATATACTACGTTCCTTCCTTGAGGAATGGCAGAGCAATAAATCAGCTAAAATTGCAAATTAA 2424 0.4014 MDATQTEKIYVAVGDDAQDGFNTLNWALKKWKSHPISVVILHVTHNISKDYVYTPFGKLPARSLNDEKLEALRKDEKERIKKLFSKYIAFCGKVSAEILEVEKFDEPMQKRVIDLISGLGITKLVMGFSFMKPSLKSKGAISGLFYVHQHKPSLCELFIVCGGKQVFLRGNNDEKIMEDDSGVMVAKMRDKVTFKDWLDKMFSDKTNDYSQNRLSASPSSTNLVQNQWEFYLQDIENYYQELLSSNLEEGSYVQENDGSHVCPKIQLHVTELNNSNKSTVEKIEMLKNKLNEARKTIELKKKEAKENIERRTKAEWAISLCNSRAEEIEGRIREEVSTKENLNKELHLEKEQREEMRTEIKEKKQRMSSLVELQSELSNKLQLSTMARSRAETQVERAVRERTEMVREIEELRKQRDVLNRRIEFCKQKDAIGMAARLSDNITSIGMREYSEEELRLATDNFSERLRLKSGRDWTNVYRGRFNHSTVAIKMMSSFHSLSQEEFQSKVRFLGDIRQPHVVAMVGFCSKPKCIILEYMGNGSLQDMLFSRRRNRGLRWHDRIRIATEVCSGLGFLNSSSQRPIVHCHLSPSHILLDRNLVAKITGFGLQECDDKDCNVESDLRAGGVLLMQLLTGRNWAEPVDEPMTVGMDRETLVNILDDMAGQWPLDLAKELLGLAMICLSVKNKPNPNLSIARVLEELNKIRRKGDEIVAKEDRKVIIGGSIDREGSSDVPSVFLCPILQEVMKNPHVAADGFSYELEAIEQWLHSGHDTSPMTNLRLKHTSLTPNHILRSFLEEWQSNKSAKIAN 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01480 807 Pfam Protein tyrosine and serine/threonine kinase 474 610 IPR001245 GO:0004672|GO:0006468
Mepo5g01480 807 Gene3D Phosphorylase Kinase; domain 1 434 536 - -
Mepo5g01480 807 Coils Coil 388 429 - -
Mepo5g01480 807 SMART Ubox_2 734 797 IPR003613 GO:0004842|GO:0016567
Mepo5g01480 807 ProSiteProfiles U-box domain profile. 730 804 IPR003613 GO:0004842|GO:0016567
Mepo5g01480 807 PANTHER OS02G0152300 PROTEIN 9 795 - -
Mepo5g01480 807 Gene3D Transferase(Phosphotransferase) domain 1 537 615 - -
Mepo5g01480 807 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 729 806 IPR013083 -
Mepo5g01480 807 ProSiteProfiles Protein kinase domain profile. 451 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01480 807 Coils Coil 269 314 - -
Mepo5g01480 807 Coils Coil 325 373 - -
Mepo5g01480 807 Pfam U-box domain 731 802 IPR003613 GO:0004842|GO:0016567
Mepo5g01480 807 SUPERFAMILY Protein kinase-like (PK-like) 444 696 IPR011009 -
Mepo5g01480 807 CDD RING-Ubox_WDSUB1-like 732 787 - -
Mepo5g01480 807 SUPERFAMILY RING/U-box 728 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01480 Mepo-Chr5 15517948 15522967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01480 3 807 U-box Gene Family AT5G65500 48.712 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mepo5g01480 PK_Tyr_Ser-Thr 1.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01480 - - gmx:100786771 1223.76