Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01477 ATGGAATCAAAGGAAAATAACAAAAAAGAGTTTTCAAGCGACGATGAAGCATCACCAAGAGCAATACTAGAAACCCCTGTTTCAGGAACAGAGTCAGACAACAGTGGAAGCAGCAGTTTCTCCTCATTCTCACCGGAGGATTCACCGCCGGTGGAAGGAAAATTAGGTTGGAAGGAAAGTAACATGATGCAATGGAAATCAATGATTGATGTTTTCAAGTTCAAGTCAGTGAGAAGATTAACAGCTATTCCTTTGCTTGCTGCTGCTAACAATGATATTGCTAAGAAAGGTTTGACTAAGAAATTGGCTAGGATTCGAAGTGCTGAAGAAACTATTGCTATTGGTGCTATTCCTACTAAACCTTCTTGGAGGAATTTTGATTATGATGAACTTGCTGCTGCTACTAATGATTTCAGTTCAGAGAACTTGATTGGAAAAGGTGGTCATGCTGAAGTATACAAAGGACAGTTATCAGATGGTCAAGTTGTTGCAGTAAAGAGACTAATGAAGAACGACAAGGATTTCGCGGATAGAGCAGGCGATTTCTTAACAGAGCTTGGAATCATTGCACACGTTAATCACCAGAACGCTACACGCCTTATCGGGTTTGGTATCGACCGTGGCCTCTACTTTGTCTTACAATTAGCTCCGTATGGAAGTCTTTCTTCTTTGTTATTTGGTTCTGAATGCTTAGAGTGGAAGACAAGATACAAGGTGGTTATCGGAGTAGCCGATGGGTTGCATTATCTCCATCAAGATTGTCCCAGACGAATCATTCATAGGGACATCAAAGCCTCAAACATATTACTCAATGATAATTATGAAGCCGAGATATCAGATTTTGGACTGGCAAAGTGGCTTCCAAATAATTGGGCACACCATGTTGTTTTTCCTATAGAAGGCACATTTGGGTATTTGGCTCCAGAGTACTTTATGCATGGTATTGTGGATGAGAAGACAGATGTATTCGCATTCGGTGTTTTACTACTCGAACTCATAACCGGTCGTCGTGCAGTTGATTCCGATAGTAAGCAAAGTCTTGTGATTTGGGCTAAGCCACTTCTTGACTCAAAAAATGTGCAAGAGCTAGCAGATCCTAGATTGGAAGAGAAATATGATCCCACTGAAATGAACCGTGCCATGATGACAGCTTCCTTGTGCGTCCACCATTCGTCCTCCAAGCGGCCATTCATGAAACAAGTTGCGCAACTACTGAAGGGCGAGGAAGCCTTTATCGATTCCAAACATAATTCAGGTGCTTCAAGATCACTCTCGTTAGAGGCATGTGACTTAGAAGATTATACTTGCTCTAATTACTTGAAGGACCTCAACCGCCATAGGGAATTAGTCATGGAGTGA 1359 0.4172 MESKENNKKEFSSDDEASPRAILETPVSGTESDNSGSSSFSSFSPEDSPPVEGKLGWKESNMMQWKSMIDVFKFKSVRRLTAIPLLAAANNDIAKKGLTKKLARIRSAEETIAIGAIPTKPSWRNFDYDELAAATNDFSSENLIGKGGHAEVYKGQLSDGQVVAVKRLMKNDKDFADRAGDFLTELGIIAHVNHQNATRLIGFGIDRGLYFVLQLAPYGSLSSLLFGSECLEWKTRYKVVIGVADGLHYLHQDCPRRIIHRDIKASNILLNDNYEAEISDFGLAKWLPNNWAHHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSDSKQSLVIWAKPLLDSKNVQELADPRLEEKYDPTEMNRAMMTASLCVHHSSSKRPFMKQVAQLLKGEEAFIDSKHNSGASRSLSLEACDLEDYTCSNYLKDLNRHRELVME 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01477 452 SMART serkin_6 138 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01477 452 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 217 418 - -
Mepo5g01477 452 Gene3D Phosphorylase Kinase; domain 1 114 213 - -
Mepo5g01477 452 Gene3D Transferase(Phosphotransferase) domain 1 217 423 - -
Mepo5g01477 452 MobiDBLite consensus disorder prediction 25 46 - -
Mepo5g01477 452 SUPERFAMILY Protein kinase-like (PK-like) 122 405 IPR011009 -
Mepo5g01477 452 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 112 215 - -
Mepo5g01477 452 Pfam Protein kinase domain 139 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01477 452 ProSiteProfiles Protein kinase domain profile. 138 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01477 452 MobiDBLite consensus disorder prediction 1 17 - -
Mepo5g01477 452 ProSitePatterns Protein kinases ATP-binding region signature. 144 166 IPR017441 GO:0005524
Mepo5g01477 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Mepo5g01477 452 PANTHER OS08G0249100 PROTEIN 5 425 IPR046958 -
Mepo5g01477 452 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01477 Mepo-Chr5 15443715 15451626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01477 115 435 Trihelix Transcription Factor Family AT5G38560 41.618 1.46e-73 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mepo5g01477 Pkinase 2.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01477 - - gmx:100818314 691.804