Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01453 ATGGAAAACACATTATCAAATGAAAAGGAAGTGCCTGTCTTCGGGTGGGCTGCTAGAGATTCCTCAGGAAATCTCTCCCCCTTCAGCTTCTCTAGAAGGGCAAATGGAGATCGTGATATCACAGTGAAGATACTCTTTTGCGGGGTTTGCCATGGAGACGTTCATTTCGCCAAGAATGAGCTAGGCAATAGCATATATCCCATGGTTCCCGGCCATGAGATAGTGGGTGAAGTGATAAAGGTGGGCCAAAGTGTGACAAAATTCAAAATTGGTGACATAGCAGGAGTGGGACCATTATGTGGTTCATGTGGTTTATGTTCCAATTGCTCCAAAGGTTGGGAAAATTATTGTTCCAAACAAATTCTAACTTACAATTCACATGACCATGATGGATCAATAACCTATGGTGGATACTCAAATAAAATAGTGGTTAATGAGCATTTTGCTATTATAATGCCAAAAGGGTTACCACTAGAAGGTGCAGCTCCATTGCTATGTGCTGGATCAACAGTTTATAGTCCAATGATGCATCATGGACTGTGTCAAAGTGGACAACATTTGGGTGTAGTTGGGTTAGGTGGACTTGGTCATGTTGCAGTCAAGTTTGCTAAGGCTTTCAAAATGAAAGTCACTGTGATAAGTACTTCTCCTGGAAAGAAAGAGGAAGCTTTGGAAAGGCTTGGTGCTGATTCATTCTTGCTCATGAATGATCAACAACAATTGCAGGAAGCAAAGGACACAATGGACGGCATCATAGACACAGTTTCAGGCCCTCATTCACTCAACCCATTAATTGAAATGTTGAAGACATGTGGCAAATTGATTTTAGTTGGTGCATCAGTTACACCTCCTACCTTGCCATATATGCCTTTAATGTCTGGGAGGAAGATAATTGCAGGTAGTGCTGGAGGAGGAATGAAAGAGAGCCAAGACATGATTGATTTTGCAGCAAAGCACAATATCACAGCAGATATTGAAGTGATTTCGATGGATTATGTGAACACTGCTTTTGAGAGACTTGAAAAGAATGATGTTAAATACCGATTTGTCATTGATGTGGCTAATACTCTTAAGTAA 1077 0.4095 MENTLSNEKEVPVFGWAARDSSGNLSPFSFSRRANGDRDITVKILFCGVCHGDVHFAKNELGNSIYPMVPGHEIVGEVIKVGQSVTKFKIGDIAGVGPLCGSCGLCSNCSKGWENYCSKQILTYNSHDHDGSITYGGYSNKIVVNEHFAIIMPKGLPLEGAAPLLCAGSTVYSPMMHHGLCQSGQHLGVVGLGGLGHVAVKFAKAFKMKVTVISTSPGKKEEALERLGADSFLLMNDQQQLQEAKDTMDGIIDTVSGPHSLNPLIEMLKTCGKLILVGASVTPPTLPYMPLMSGRKIIAGSAGGGMKESQDMIDFAAKHNITADIEVISMDYVNTAFERLEKNDVKYRFVIDVANTLK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01453 358 SMART PKS_ER_names_mod 23 299 IPR020843 GO:0016491
Mepo5g01453 358 Pfam Alcohol dehydrogenase GroES-like domain 38 150 IPR013154 -
Mepo5g01453 358 CDD CAD1 14 352 IPR047109 GO:0016616
Mepo5g01453 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Mepo5g01453 358 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Mepo5g01453 358 SUPERFAMILY GroES-like 20 185 IPR011032 -
Mepo5g01453 358 FunFam probable cinnamyl alcohol dehydrogenase 16 180 - -
Mepo5g01453 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Mepo5g01453 358 Gene3D - 167 323 - -
Mepo5g01453 358 PANTHER ALDEHYDE REDUCTASE 8 356 IPR047109 GO:0016616
Mepo5g01453 358 FunFam Putative cinnamyl alcohol dehydrogenase 6 324 353 - -
Mepo5g01453 358 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Mepo5g01453 358 Gene3D - 16 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01453 Mepo-Chr5 15208129 15210755 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01453 14 358 Monolignol Biosynthesis Gene Families AT4G37990 63.478 1.37e-143 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01453 K23232 - fve:101301572 489.574