Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01451 ATGGCAATAGATGCTTCTAAAGTAGTAGTGTTTCCTAAGAAGGCCTTTGGATGGGCAGCTAGAGACCCTTCTGGTGTTCTATCCCCTTTCCATTTCTTTAGAAGGGAAACTGGTGAGAAAGATGTAGCATTCAAGGTGTTATACTGTGGGATATGTCACTCTGACCTTCACATTATGAAGAATGAATGGGGCAAAACAACCTATCCATTAGTCCCCGGGCATGAACTTGCTGGTATAGTAACCGAGGTTGGAAGCAAAGTAGAGAAGTTTAAAGTTGGAGACAAAGTAGGTGTGGGATACATGGTTGATTCATGTCGTTCATGCGAAAATTGTGCTGACGATATTGAGAATTACTGCCCCAAATATACTCAAACATTCAATGGTAAGTATCGTGATGGCACCATCACCTATGGAGGTTTCTCCGACTCAATGGTTGCAGACGAGCACTTTGTGATTCGCATTCCTGATAGCTTACCTCTTGATGGTGCCGGTCCTCTTCTTTGTGCTGGAGTCACAGTGTATAGTCCTCTTCGACATTTTGGACTCGACAAGCCTGGTATGAATATAGGTGTTGTTGGTCTTGGTGGACTAGGTCATATGGCTGTGAAATTTGCCAAAGCTTTTGGTGCTAAAGTAACCGTAATTAGTACATCGCCTAAAAAGGAAAAGGAAGCAATAGAACACTTAGGAGCAGACTCGTTTCTAGTAAGCCGCGATCCAGATCAGATGCAGGCTGCAATGAGTACTTTGAATGGTATTATTGACACAGTTTCGGCGAGTCATCCTGTTTTACCACTGATTGGTTTATTGAAATCTAATGGAAAGCTTGTAATGGTTGGTGCAATAGCAAAGCCTCTAGAGCTTCCTTTATTTTCTTTACTTGGAGGGAGAAAGTCAATATCAGGAAGTTTAATTGGAGGGATAAAGGAGACTCAAGAAATGATTGATTTTGCGGCAGAACACAATGTAACGCCTGAGATTGAAGTTGTTCCTATTGATTATGTCAACACAGCAATGGAGCGTCTTGCTAAAGGAGATGTCAAATATCGATTCGTGATTGATATTGGAAATTCATTAAAACCAAGCCCTTAA 1092 0.4158 MAIDASKVVVFPKKAFGWAARDPSGVLSPFHFFRRETGEKDVAFKVLYCGICHSDLHIMKNEWGKTTYPLVPGHELAGIVTEVGSKVEKFKVGDKVGVGYMVDSCRSCENCADDIENYCPKYTQTFNGKYRDGTITYGGFSDSMVADEHFVIRIPDSLPLDGAGPLLCAGVTVYSPLRHFGLDKPGMNIGVVGLGGLGHMAVKFAKAFGAKVTVISTSPKKEKEAIEHLGADSFLVSRDPDQMQAAMSTLNGIIDTVSASHPVLPLIGLLKSNGKLVMVGAIAKPLELPLFSLLGGRKSISGSLIGGIKETQEMIDFAAEHNVTPEIEVVPIDYVNTAMERLAKGDVKYRFVIDIGNSLKPSP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01451 363 SMART PKS_ER_names_mod 25 353 IPR020843 GO:0016491
Mepo5g01451 363 FunFam Cinnamyl alcohol dehydrogenase 169 325 - -
Mepo5g01451 363 SUPERFAMILY GroES-like 21 186 IPR011032 -
Mepo5g01451 363 Gene3D - 18 355 - -
Mepo5g01451 363 FunFam Putative cinnamyl alcohol dehydrogenase 6 326 355 - -
Mepo5g01451 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 323 IPR036291 -
Mepo5g01451 363 CDD CAD1 16 354 IPR047109 GO:0016616
Mepo5g01451 363 FunFam Uncharacterized protein 18 168 - -
Mepo5g01451 363 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
Mepo5g01451 363 Pfam Zinc-binding dehydrogenase 196 319 IPR013149 -
Mepo5g01451 363 PANTHER ALDEHYDE REDUCTASE 12 358 IPR047109 GO:0016616
Mepo5g01451 363 Pfam Alcohol dehydrogenase GroES-like domain 40 153 IPR013154 -
Mepo5g01451 363 Gene3D - 169 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01451 Mepo-Chr5 15190068 15192291 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01451 10 363 Monolignol Biosynthesis Gene Families AT4G37990 70.339 4.26e-172 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01451 K23232 - gmx:100816901 582.793