Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01442 ATGAAGATGGAACGTTACATGAGCAAAAGAGTTATCTTGTTGTGGTGGTACATAATGGCTTTGCAACTTTGTTTCACGTTAAGTACCTATTCAGAACATATCTCAATCAGAAGAAGCGTAAGAGGATTGGCTAATGCGCAATCTTCAGTCACTGTAAATCGTGAAAATTCTAAGCAGGTGGTGGTTAGCAATGGCATCTTTTCCCTTACTTTGGCAAATCCCGGGGGGTATGTCTTAGGAATATCATACTCCGGAATGGACAATGTACTTGAATCTGGAAATGAAGATGATGATAGAGGGTACTTTGACGTTGTTTTTAGCAAAACATTTCAAAGAGTCCATGGGACAAGTTTCTCAGTCGTAACACAGAATGAGAATATAGTGGAGGTTTCATTTTTAAGGTCATGGAGTTCTTCTATGGGTGACTCAAGTGTCCCTATAAACATAGACCAAAGGTATATAGTGAGAAAAGGCGATTCTGGATTTTACACTTATGTGGTATTTGAACGACCAAAAGGATTCCCTGCTATTAAAATTGATCAAATAAGGACCGTTTTTAAACCTAAGGAAGCCAGCTTCAACTATATGGCCATATCAGATATTAGGCAAAGAAGAATGGCATCAATGAAAGATAGAGATGACGGTCAAAAACTGGCGTATCCTGAAGCAGTTCTCTTAACACATCCATCCAATCCACAATTTAAGGGAGAGGTGGATGACAAATATCAATACTCTATTGAGAACCAATACAACCAAGTTAATGGATGGATTACCGCAGATTCTGAAAAGCCCGTGGGCTTTTGGATCATTACACCAAGTAATGAGTTCCGCAATGGCGGGCCCATTAAGCAAGATCTTACATCTCATGTTGGCCCAATTTGCCTCTCTATGTTTGTAAGCACCCACTATGCTGGCAAAGACGCAGCCATCCAATTCCAAGAAGGAGAGACTTATAAAAAGGTTTTTGGGCCTGTCTTTGTTTACATGAATTCAGCCTCAAGTAAAGATCAATTTAAATCTCTATGGTCAGATGCTAAACAAAAGCTGTCAAATGAACTCAAAAGTTGGCCTTATAATTTTATTCAATCAAAAGATTTCATTCCACCTAATCAACGTGGAACACTAACCGGACATTTACAAGTCCAAGACGGGGGCGGCAAATCTCAAAATGCTAAGAATGCATACATTGGTCTAGCTTTGCCTGGGGATGCAGGATCATGGCAGAGAGAAGGCAAGGGCTATCAATTTTGGACTAGAGCAGACCAAAACGGAAACTTTGTTATAAAAAACATTGTACCTGGGTCATACAACTTGTTTGCATGGGTTCCTGGCTACATTGGAGATTACAAATATAATTCTCCAATTACAATTAAACCAGGAAGCACCATCAACTTGAATTCACTCGTATATAATCCTCCAAGAAATGGCCCAACTGTTTGGGAAATTGGCATTCCAGATCGCTCAGCTGGAGAATTTTTTGTACCAAAGCCTTACGCTAACCTAGTGAACAAATTATTCGCGAATGATATCCCAGACCAGTTTAGGCAATATGGTCTATGGAGCCGTTACAGTGAATTATATCCAACTCAGGATCTTGTTTACACAGTTGGTGTTAGTGACTATCGAAAGGATTGGTTTTATGCTCATGTTCCAAGGACCACAGGAAATAATAAATTTCAAGCAACCACATGGAAGATTGTATTTGAACATGGTGCTGTAATAAGTGGAAACTACACATTACAACTTGCCTTAGCAAGTGCCTCTAATGCTGAAGTGCAGGTTTGGTTCAATAACATGAATGCCAATCCTCCCTACTTCACAACAAAGAGAATAGGAGATGATAATGCCATACCAAGGCATGGAATCCATGGATTATATTGGTTGTTTAGCATAGAAGTACCTAGTGTTCATTTGGTAAAAGGAAAAAATACAGTATTTTTGAGACAATCAAGATTTGACTCATTTTGGCAAGGAGTTCTATATGATTATATCCGCTTAGAAAGTCCTCCAACTACCAAGTTGAAACAGTGA 2031 0.3914 MKMERYMSKRVILLWWYIMALQLCFTLSTYSEHISIRRSVRGLANAQSSVTVNRENSKQVVVSNGIFSLTLANPGGYVLGISYSGMDNVLESGNEDDDRGYFDVVFSKTFQRVHGTSFSVVTQNENIVEVSFLRSWSSSMGDSSVPINIDQRYIVRKGDSGFYTYVVFERPKGFPAIKIDQIRTVFKPKEASFNYMAISDIRQRRMASMKDRDDGQKLAYPEAVLLTHPSNPQFKGEVDDKYQYSIENQYNQVNGWITADSEKPVGFWIITPSNEFRNGGPIKQDLTSHVGPICLSMFVSTHYAGKDAAIQFQEGETYKKVFGPVFVYMNSASSKDQFKSLWSDAKQKLSNELKSWPYNFIQSKDFIPPNQRGTLTGHLQVQDGGGKSQNAKNAYIGLALPGDAGSWQREGKGYQFWTRADQNGNFVIKNIVPGSYNLFAWVPGYIGDYKYNSPITIKPGSTINLNSLVYNPPRNGPTVWEIGIPDRSAGEFFVPKPYANLVNKLFANDIPDQFRQYGLWSRYSELYPTQDLVYTVGVSDYRKDWFYAHVPRTTGNNKFQATTWKIVFEHGAVISGNYTLQLALASASNAEVQVWFNNMNANPPYFTTKRIGDDNAIPRHGIHGLYWLFSIEVPSVHLVKGKNTVFLRQSRFDSFWQGVLYDYIRLESPPTTKLKQ 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01442 676 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 51 670 - -
Mepo5g01442 676 SUPERFAMILY Galactose-binding domain-like 475 667 IPR008979 -
Mepo5g01442 676 CDD RGL4_C 480 667 - -
Mepo5g01442 676 Gene3D - 42 344 IPR014718 GO:0030246
Mepo5g01442 676 Pfam Rhamnogalacturonate lyase family 44 238 IPR010325 -
Mepo5g01442 676 Gene3D - 476 667 - -
Mepo5g01442 676 CDD RGL4_M 371 468 IPR029413 -
Mepo5g01442 676 Pfam Polysaccharide lyase family 4, domain II 392 465 IPR029413 -
Mepo5g01442 676 SUPERFAMILY Galactose mutarotase-like 55 334 IPR011013 GO:0003824|GO:0005975|GO:0030246
Mepo5g01442 676 CDD RGL4_N 53 337 - -
Mepo5g01442 676 Pfam Polysaccharide lyase family 4, domain III 478 666 IPR029411 -
Mepo5g01442 676 SUPERFAMILY Starch-binding domain-like 367 467 IPR013784 GO:0030246
Mepo5g01442 676 Gene3D - 367 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01442 Mepo-Chr5 15105945 15112022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01442 54 669 Polysaccharide Lyase AT1G09890 53.025 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01442 K18195 - gmx:100781089 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01442 5 15105945 15112022 Mepo1g02485 1 26054045 26060783 PCT