Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01427 ATGAACACACAAGGTCTTGAAACAGTGATTGACATAAAGCATAAACCTGTTAGTTTCACCGGAGGACTTGAATTTGAATCACTTACATACACAGTGACAAAGAAGAAGAAAGTTGATGGAAAATGGTCAAATGAAGATGTTGATTTGTTGCATGATATAACTGGTTATGCACCAAAGGGTTGTATCACTGCAGTAATGGGACCAAGTGGTGCTGGAAAATCAACTTTGTTGGATGGACTTGCTGGAAGAATTGCAAGTGGAAGTCTTAAAGGAAAAGTTTCATTGGATGGAAATAGTGTGAATGCAAGCTTGATTAAAAGAACTTCTGCTTATATTATGCAAGAAGATAGGCTTTTTCCTATGCTTACTGTCTATGAGACTTTGATGTTTGCTGCAGATTTCAGATTAGGGCCACTTTCAGCTGTTGATAAGAGGCAGAGAGTTGAGAAGCTTATTGAGCAGCTTGGCTTATCATCATCTAGAAACACCTACATAGGAGATGAAGGCACAAGAGGAGTCTCTGGTGGAGAGCGCCGCAGAGTCTCAATCGGCGTAGACATAATCCATGGACCTTCACTCCTTTTCCTAGATGAACCAACTTCAGGACTAGACTCAACAAGTGCTCTTAGTGTGATCGAAAAACTACATGACATAGCAAGAAATGGTAGCACAGTTATTCTCACCATTCATCAACCTTCATCAAGAATCCAGCTTCTGCTTGACCATCTCATCATCCTTGCTAGAGGACAACTCATGTTTCAAGGATCACTCAAAGATGTTGGTCACCATTTGAACCGAATGGGACGAAAAGTTCCGAAAGGAGAGAATCCAATTGAGAATCTCATTGATGTGATACAAGAGTATGATCAGTGTGATTTTGTTGGTGTTGAGGTGCTAGCTGAATTTGCACGTACCGGAATGAAACCACCTCTTTTGAGTGATATGGAGGAAATAATTTCATATACTAATTCCATTGCACCTTCACCATCTTCTTCTTTGCATAGAAGATCTAAATATGAGGAAAAATCTCAAGATTTCTCTTATTCATCACAAATTAGTAGAAGGAGTTTGAATGATGAGTTTGATCATAGTATTAGAAGTCCATATAATAACACACCAATGTCATGGAGTGCTAGTAATAGTGCAGCTTTCTTGAAATTCACACCCTCAAGACTTAAAAATGAGAACAAGGTGCAAAAGCCTCCAAGCCATGCTTCCCCTGGCATCTACACATACTCAAGTGAAATCCTTCCAGCAACACCAACACCACATAGCAGTGATTATGTAGTGGATGAGAATGACTACCTTACACCTACAAATAGCTCACAAGAACATCTTGGTCCAAAGTTTGCAAATTCCTACATAGGAGAGACATGGATCCTAATGCGCCGCAACTTCACAAACATACGGAGAACCCCCGAGCTTTTTCTATCAAGACTAATGGTCCTCACCTTCATGGGAGTCATGATGGCCACAATGTTCCACAATCCAAAAACAACATTACAAGGAATCACGAATCGTCTCAGTTTCTTCATCTTCACAGTGTGTCTATTTTTCTTCTCTTCCAATGATGCCGTCCCTGCCTTCATCCAAGAGAGGTTCATCTTCATCCGTGAAACTTCTCATAATGCCTATAGAGCTTCTTGTTACACCATAGCTAGCCTAATCACTCACATGCCGTTTCTTGCGCTCCAAGCTTTAGCCTATGCAGCCATTGTTTGGTTTGCTTTAGAACTTAGAGGCCCTTTTATATACTTCTTCCTTGTTCTCTTCATTTCTCTTCTTTCGACAAATTCGTTTGTTGTGTTTGTGAGTTCAATTGTTCCAAATTATATCTTGGGTTATGCTGCAGTGATAGCCTTCACTGCCTTGTTTTTCTTGTTTTGTGGATACTTCTTGAGCAGCGAGGATATTCCGCTTTATTGGCGTTGGATGAACAAGGTTTCGACGATGACATACCCTTATGAAGGACTCTTGATGAATGAGTATCAGACTAATGAAACTTTTGGATCAAATGATGGTGTATCTGTTACTGGTTTTGATATCTTGAAAAGTCTTCATATTGGTACTGAAGAGATTAAGAAAAGGAATAATGTGCTTATAATGTTAGGTTGGGCTGTTCTATATAGGATTTTATTTTACATTATTCTTCGTTTTGGATCAAAAAATCAAAGGTCCTAG 2181 0.3943 MNTQGLETVIDIKHKPVSFTGGLEFESLTYTVTKKKKVDGKWSNEDVDLLHDITGYAPKGCITAVMGPSGAGKSTLLDGLAGRIASGSLKGKVSLDGNSVNASLIKRTSAYIMQEDRLFPMLTVYETLMFAADFRLGPLSAVDKRQRVEKLIEQLGLSSSRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSALSVIEKLHDIARNGSTVILTIHQPSSRIQLLLDHLIILARGQLMFQGSLKDVGHHLNRMGRKVPKGENPIENLIDVIQEYDQCDFVGVEVLAEFARTGMKPPLLSDMEEIISYTNSIAPSPSSSLHRRSKYEEKSQDFSYSSQISRRSLNDEFDHSIRSPYNNTPMSWSASNSAAFLKFTPSRLKNENKVQKPPSHASPGIYTYSSEILPATPTPHSSDYVVDENDYLTPTNSSQEHLGPKFANSYIGETWILMRRNFTNIRRTPELFLSRLMVLTFMGVMMATMFHNPKTTLQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASCYTIASLITHMPFLALQALAYAAIVWFALELRGPFIYFFLVLFISLLSTNSFVVFVSSIVPNYILGYAAVIAFTALFFLFCGYFLSSEDIPLYWRWMNKVSTMTYPYEGLLMNEYQTNETFGSNDGVSVTGFDILKSLHIGTEEIKKRNNVLIMLGWAVLYRILFYIILRFGSKNQRS 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01427 726 FunFam ABC transporter G family member 6 33 271 - -
Mepo5g01427 726 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 21 712 - -
Mepo5g01427 726 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 23 273 IPR003439 GO:0005524
Mepo5g01427 726 Gene3D - 23 270 IPR027417 -
Mepo5g01427 726 SMART AAA_5 59 257 IPR003593 GO:0016887
Mepo5g01427 726 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 268 IPR027417 -
Mepo5g01427 726 CDD ABCG_EPDR 23 255 - -
Mepo5g01427 726 ProSitePatterns ABC transporters family signature. 173 187 IPR017871 GO:0005524|GO:0016887
Mepo5g01427 726 Pfam ABC-2 type transporter 230 287 IPR043926 GO:0140359
Mepo5g01427 726 Pfam ABC transporter 50 201 IPR003439 GO:0005524
Mepo5g01427 726 MobiDBLite consensus disorder prediction 327 351 - -
Mepo5g01427 726 Pfam ABC-2 type transporter 458 663 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01427 Mepo-Chr5 14975776 14983031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01427 12 349 Calmodulin-binding Proteins AT2G36910 28.161 6.91e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01427 K05681 - gmx:100804809 1167.91