Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01383 ATGGCAACGTTAGAATCAACCATAACTGTATTCACACATCAACGTTTTTCAAATAATAACTACCATTTCCTAGCAAAATCACCAGATTCCATAAAACTCCATGCTTCAACTTCAATCCCTTCTTCTTCTTCTTTTTCTCTTTTCTCTCACAATAACCACAAACTTCACTTTTCTTCTTCTTATTCCAAATCCAAAACACTATGCTACGCTTTACAAGAGGTAACAGAAGCAGCAACAACAACTGAAGAAGAGGAAGCAAAAACAGAGACATTGAACAACGTTAAGAAGAAGACACTCGCTGTCTTTAACTTGCCTTGGTCTCTTTCTAAGCGGGATATCAAGGATCTCTTCGCTCAATGTGGAACTGTAACTGACGTTGAGATTGCAAAGAACAAAGATGGGAAGGGAAAAGGTTATACATTTGTTACTATGGGTTCAGGAGAAGAGGCTCAGGCTGCTGTTGATAAATTTAATGCTACTGAAATATCAGGCCGGATAGTAAGGGTAGAGTTTGCAAAGGGATTTAAGAAATCCCCTCCACCTCCTCCAGCTCCCACTCCTAAGGAACCACGTTATGTAATCTATGCATCCAACCTTGCGTGGAAAGCAAGATCTACACATCTCAGAGACATCTTCACTGAGAATTTCAAAACACCAGTTTCAGCCAGGGCTGTCTTTCAAACCCCTGGTGGGAAATCTGCTGGGTATGGATTTGTTTCTTATCATACGGAGGAGGAAGCAGAAGCTGCCATTTCTGCTTTGCAAGGGAAGGAGTTACTGGGACGACCACTTCTCGTAAAAATAAGTGAAAAGAAAACAGTTAAAGAAGCTGGAAGTGAAGAAGTTGTTGAAGAGAAAGTTGACGACGCTCAACCAGAAGTTGTTGAAGCGAAAGTTGATGACGCTCAACCAGAAGTTGTTGAAGAGAAAGTTGACGACGCTCAACCAGAAGTTGCTGAAGCGAAAGTTGACGATGCTCAACCAGAAGTTGTTGAAGCGAAAGTTGACAACTCTCAACCAGAAGAGTCATAA 1032 0.4138 MATLESTITVFTHQRFSNNNYHFLAKSPDSIKLHASTSIPSSSSFSLFSHNNHKLHFSSSYSKSKTLCYALQEVTEAATTTEEEEAKTETLNNVKKKTLAVFNLPWSLSKRDIKDLFAQCGTVTDVEIAKNKDGKGKGYTFVTMGSGEEAQAAVDKFNATEISGRIVRVEFAKGFKKSPPPPPAPTPKEPRYVIYASNLAWKARSTHLRDIFTENFKTPVSARAVFQTPGGKSAGYGFVSYHTEEEAEAAISALQGKELLGRPLLVKISEKKTVKEAGSEEVVEEKVDDAQPEVVEAKVDDAQPEVVEEKVDDAQPEVAEAKVDDAQPEVVEAKVDNSQPEES 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01383 343 MobiDBLite consensus disorder prediction 300 343 - -
Mepo5g01383 343 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 192 271 IPR000504 GO:0003723
Mepo5g01383 343 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 100 166 IPR000504 GO:0003723
Mepo5g01383 343 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 194 264 IPR000504 GO:0003723
Mepo5g01383 343 SUPERFAMILY RNA-binding domain, RBD 97 270 IPR035979 GO:0003676
Mepo5g01383 343 CDD RRM_SF 101 170 - -
Mepo5g01383 343 Gene3D - 179 282 IPR012677 -
Mepo5g01383 343 Gene3D - 70 178 IPR012677 -
Mepo5g01383 343 PANTHER OS02G0815200 PROTEIN 38 272 - -
Mepo5g01383 343 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 97 174 IPR000504 GO:0003723
Mepo5g01383 343 SMART rrm1_1 193 267 IPR000504 GO:0003723
Mepo5g01383 343 SMART rrm1_1 98 170 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01383 Mepo-Chr5 14328972 14334699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01383 103 311 Eukaryotic Initiation Factors Gene Family AT4G34110 26.047 3.45e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01383 - - gmx:100792275 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01383 5 14328972 14334699 Mepo5g01383 5 14328972 14334699 ECH