Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01381 ATGGCACCTTCTTTTGACATAACTAGTCACACTGTTTGTGTCATGGATGCTTCAGGTCAATTAGGCTTTAGCCTTGTTCAAAGACTTCTTCAAAGAGGCTATACCGTTCATGCCTCAATTCAACAATATGGAGAAGATCCATTCAATGGGATTTCAGCTGATTCTGATAAATTAAAGATTTTTCGATCAGACCCTTTTGATTATCATAGCATAATTGATGCTCTTAGAGGTTGCTCTGGATTGTTTTACTCATTTGAACCTCCCCTTGACCAACCCAATTATGATGAATATATGGCTGACGTGGAAGTTAGAGCAGCACACAACGTGCTTGAAGCTTGTGCTCAAACAGAAACAATAGACAAAGTTGTGTTTACATCCTCAGCAACTGCTGTTGTTTGGAGGGAAGATCGTAAGACCATAGAACCTGATTTGGATGAAATACATTGGAGTGATGTTAATTTCTGTCGCAAATTCAAGTTATGGCATGGGATGTCAAAGACACTAGCAGAGAAAACAGCGTTTGCCTTAGCAATGGACAGAGGAGTGAATATGGTATCAATCAATGCTGGACTATTGATGACACATGATCTCTCCATCAAACACCCTTACTTAAGAGGTGCTGCTGAAATGTACGAGGATGGTGTCTTTGTGACCGTTGATTTAGGATTCTTGGTGGATACTCACATTTGTGTCTACGAGGATGTCTCATCGTACGGTCGTTATTTATGCTTTAATCACATTATTAATACTCAAGACGACGCCGTTCAGCTTGCACATAAGTTAACACCAACCGCATCTTCTTCTTTACCACAAAGTGATGACTATGGAAAGAGTTACATTGAACAGAAAATAAGCAACAAGAAGTTGAACAAATTGATGGTGGACTTTGAGGCTTAA 897 0.3958 MAPSFDITSHTVCVMDASGQLGFSLVQRLLQRGYTVHASIQQYGEDPFNGISADSDKLKIFRSDPFDYHSIIDALRGCSGLFYSFEPPLDQPNYDEYMADVEVRAAHNVLEACAQTETIDKVVFTSSATAVVWREDRKTIEPDLDEIHWSDVNFCRKFKLWHGMSKTLAEKTAFALAMDRGVNMVSINAGLLMTHDLSIKHPYLRGAAEMYEDGVFVTVDLGFLVDTHICVYEDVSSYGRYLCFNHIINTQDDAVQLAHKLTPTASSSLPQSDDYGKSYIEQKISNKKLNKLMVDFEA 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01381 298 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 289 - -
Mepo5g01381 298 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 14 140 IPR002225 GO:0003854|GO:0006694|GO:0016616
Mepo5g01381 298 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 264 IPR036291 -
Mepo5g01381 298 CDD FR_SDR_e 12 294 - -
Mepo5g01381 298 FunFam Cinnamoyl-CoA reductase-like SNL6 isoform A 4 298 - -
Mepo5g01381 298 Gene3D - 4 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01381 Mepo-Chr5 14312232 14315551 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01381 11 296 Monolignol Biosynthesis Gene Families AT5G58490 30.592 8.31e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01381 - - gmx:100790333 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01381 5 14312232 14315551 Mepo5g01381 5 14312232 14315551 ECH