Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01376 ATGGTGTGTTGTGGTGGTCGGTGGAGGGCATTGAACTTGTTGAGGCGTTACATATTTCAGGAATCTTATGCCAGGTGTGGGAAGAGTTGTAGGTTAAGGTGGACAAATTATTTGAGGCCTGATATCAAGAGAGGGAAATTCACTGATGAAGAGGAAAGAGTTATCATCAACCTTCATTCAGTACTTGGAAACAAGTGGTCGAAGATTGCAGCTCATCTACCAGGACGAACAGATAATGAGATAAAGAATTATTGGAACACAAACATAAGGAAAAAGCTTCTCAAGATGGGAATTGATCCTGAAACTCACAAGCCAAGAACTGATTACAATCACCTCATGAGTCTTTCAAACTTACTTGGCATGTCAAATATAGGCAACACTTTTAGCAACAACCCTCTTGGTTTACAACCAGATATTACCCACCTAGCCAAAATGCAATTGTTGCAAAATATGTTGCAAATTATGAACACCAATAATTCATTTGGTGACTTGGGGAATTACCCTTATAACCCCTTAGGGAATATTAACCCTAGCTTTAATCCATTCAATTTGTTTTTTAATGGAACAAACACAATTCAAACTAATGAGCTATTAGGTTTGAGTGGTGGTGAAGAATATGCTATGAACCCTAGTTTATACTCTTATGGACAAAGTGAGTCTTCAAAGCAGGATATTTCAAAAGGTGGATCAAGTTTACAAGATCTTGATTATAGCAAAATGAGAAGCATTTCATGCGAAAATCAACAAGAAAATCTACTTCCTGCTTTGGTTGCTTCCTCTCCTAGAACTGGAATTTTCAATCAAATGGAAAATGATTGTAACAAAGCTCAAATGTCCATTGATCACTCACCTTCAAATGCAATCTTTGATGATTGGGAGAAGTTCCTTGACGATGAATCAAGTGGTGGCTCCTACTGGAAAGAGCTTTTAGAGTAA 936 0.3761 MVCCGGRWRALNLLRRYIFQESYARCGKSCRLRWTNYLRPDIKRGKFTDEEERVIINLHSVLGNKWSKIAAHLPGRTDNEIKNYWNTNIRKKLLKMGIDPETHKPRTDYNHLMSLSNLLGMSNIGNTFSNNPLGLQPDITHLAKMQLLQNMLQIMNTNNSFGDLGNYPYNPLGNINPSFNPFNLFFNGTNTIQTNELLGLSGGEEYAMNPSLYSYGQSESSKQDISKGGSSLQDLDYSKMRSISCENQQENLLPALVASSPRTGIFNQMENDCNKAQMSIDHSPSNAIFDDWEKFLDDESSGGSYWKELLE 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01376 311 ProSiteProfiles Myb-like domain profile. 39 89 IPR001005 -
Mepo5g01376 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 93 IPR017930 -
Mepo5g01376 311 Gene3D - 45 112 - -
Mepo5g01376 311 CDD SANT 46 89 IPR001005 -
Mepo5g01376 311 Pfam Myb-like DNA-binding domain 44 87 IPR001005 -
Mepo5g01376 311 Gene3D - 4 43 - -
Mepo5g01376 311 FunFam Transcription factor MYB39 46 107 - -
Mepo5g01376 311 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 6 244 - -
Mepo5g01376 311 SUPERFAMILY Homeodomain-like 20 100 IPR009057 -
Mepo5g01376 311 SMART sant 43 91 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01376 Mepo-Chr5 14247488 14249646 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01376 6 311 MYB Transcription Factor Family AT5G16770 43.344 6.74e-63 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo5g01376 Myb_DNA-binding 3.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01376 K09422 - gmx:778082 366.311