Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01373 ATGGAATCTAAAGAAGGTGATGAAAGAAAAAAAGAACACAAAGTTCCTATGTTAAAGCTGTTTTCTTTTGCTGACTCTTATGATTATGTCTTAATGTTCATTGGATCTATTGGAGCCATTGTTCATGGCGCTTCTGTTCCTATTTTCTTTATTTTCTTTGGAAAGTTGATCAATGTTATTGGCTTGGCTTATCTTTTCCCTAAGGAAGCCTCTCACAAAGTTGCCAAGTACTCATTGGATTTTGTGTATCTAAGTGTAGCAATATTATTTTCATCTTGGACAGAGGTGGCTTGTTGGATGCATACTGGAGAAAGACAAGCAGCAAAGATGAGAATGGCTTATTTAAAGTCTATGTTAAATCAAGATATAAGTTTATTTGATACTGAGGCATCCACTGGGGAGGTCATTTCTGCTATTACAAGTGACATTATTATTGTTCAAGATGCTCTATCAGAGAAGGTAGGGAACTTCTTGCACTACATTAGCCGATTCATAGCTGGATTTACAATTGGATTTGTGAGAGTGTGGCAGATTAGTTTAGTGACACTTTCAATTGTCCCAGCTATTGCCCTTGCTGGAGGTTGTTATGCATATGTTACTATTGGCCTTATTGCAAAAGTTAGAAAAGCATATGTCAGGGCTGGTGAAATTGCTGAAGAGGTCATAGGCAATGTTAGAACAGTACAAGCATTTGCAGGTGAAGAAAGAGCAGTAAGATCATATAAAGCAGCTCTTGTGAAAACTTACGTAAACGGTAGAAAAGCAGGATTAGCAAAGGGTCTTGGACTTGGCTCAATGCATTGTGTTCTGTTTCTATCTTGGGCTTTACTTGTTTGGTACACTAGCGTTGTTGTTCATAAGAACATTGCCAATGGTGGCGAGTCATTCACTACCATGCTCAACGTCGTCATCTCTGGCCTGTCACTTGGGCAGGCAGCACCAGATATCTCGGCGTTTATCCGAGCAAAGGCGGCGGCTTATCCCATTTTTGAGATGATAGAGAGGGATACAGTGAGCAAAAAAAGCTCAAAAACCGGTCGAAAATTAAGCAAAGTGGATGGTCATATCCAGTTTAAGGATGTCTGTTTCAGTTATCCGTCTCGTCCAGATGTAGCAATCTTCAACAACCTAAATCTGGACATTCCTGCAGGGAAAATTGTAGCACTTGTGGGAGGAAGTGGTTCTGGAAAGAGCACTGTTGTATCGTTGATCGAACGTTTTTACGAACCAATTTCTGGTCAGATACTTTTAGACAAGAATGATATCAGGGAACTTGATCTCAAATGGCTTAGGCAACAAATTGGACTAGTTAATCAAGAACCTGCACTTTTTGCTACAAGCATCAAGGAGAATATTTTGTATGGGAAAGATGATGCTACTCTTGAAGAACTAAAACGTGCTGTGAAGCTTTCGGATGCTCAATCTTTCATCAACAACCTTCCCGAAAGATTAGACACTCAGGTTGGTGAGAGAGGGATACAACTATCAGGTGGACAGAAGCAAAGGATTGCGATATCTCGCGCGATCGTGAAGAATCCATCGATCCTTTTATTAGATGAAGCAACTAGTGCTTTGGATGCCGAGTCTGAGAAGAGTGTACAGGAGGCTCTCGATCGCGTCATGGTTGGAAGAACAACTATTGTAGTTGCACACAGACTTTCTACCATTAGGAATGCAGATGTTATAGCTGTTGTTCAAGGAGGGAGGATTGTGGAGACTGGTAACCATGAAAAACTCATGTCCAATCCAACTAGTGTTTATGCATCTCTTGTTCAACTCCAAGGAGCAAGTTCTTTGCAACGCCTTCCCTCGGTTGGACCAAGCTTAGGACACCAATCAAGCATAAGCTATTCAAGAGAATTATCACGTACTGGAACAAGCATCGGTGGTAGTTTTCGATCAGACAAAGACTCAATTGGCCGTGTTGGTGGTGATGATGTAAGCAAGTCAAAGCATGTTTCAGCAAAAAGACTATATTCTATGATTGGTCCTGACTGGCCTTACGGATTTTTTGGGACCTTATGTGCATTTGTTGCTGGAGCACAAATGCCACTTTTTGCACTTGGAATCTCTCATGCTCTTGTCTCATATTATATGGATTGGGAGACAACGCAGCGCGAAGTTAGGAAAATTGCTTTCCTCTTCTGTGGAGGTGCAGTTATAACTATCACAGTCCATGCCATTGAACATCTTTTTTTCGGTATCATGGGCGAGCGACTTACCCTTCGTGTGCGAGAAATGATGTTTACTGCTATTTTGAAGAATGAAATAGGATGGTTTGATGAAACAACCAACACAAGTTCTATGCTTTCATCGCGTTTAGAGTCTGACGCAACATTAATGCGAACAATAGTTGTCGATCGCTCGACGATTCTGTTACAGAATCTTGGTCTGGTTGTTGCTTCATTTATTATTGCCTTCCTTTTGAACTGGAGAATAACACTTGTTGTCTTGGCCACATATCCTTTGATCATTAGTGGTCACATTAGTGAGAAACTTTTCATGAAAGGCTATGGTGGCAACTTGAGCAAAGCATATCTAAAAGCCAACATGCTTGCTGGCGAGGCTGTGAGCAACATACGCACTGTTGCTGCATTTTGTTCTGAAGAAAAGATTCTTGATCTATATGCTGACCAGCTCGTCGGTCCTTCCAAACATTCATTTCGGCGTGGCCAAATTGCCGGCTTATTCTATGGCATTTCTCAGTTCTTCATTTTCTCATCTTATGGCCTTGCCTTATGGTATGGATCTGTTTTGATGGGAAAGGAACTTGCTAGCTTTAAATCAGTTATGAAGTCATTTATGGTTTTGATTGTAACGGCACTTGCTATGGGAGAAACTTTGGCACTAGCACCAGATCTTTTGAAAGGGAACCAAATGGTTGCTTCAGTTTTTGAAGTAATGGATAGAAAGTCAGAAATTAAAGGCGATGCCGGAGAAGAGTTAAAGACAGTTGAGGGAACAATTGAGCTCAAAAGAATCAATTTCAACTACCCTTCAAGGCCAGATGTTATTATTTTCAAGGATTTTAGTCTAAGAGTTCCTTCAGGCAAAAGTGTTGCCTTAGTGGGACAAAGTGGTTCTGGTAAAAGCTCTGTGATCTCACTTATACTCAGATTTTATGATCCAACATCAGGAAAGGTGTTAATTGATGGAAAGGACATCACAAGAATAAATCTAAAATCTCTTAGAAAACACATTGGTCTTGTACAACAAGAACCGGCTCTTTTCGCTACAACAATTTACGAAAACATTCTTTATGGAAAGGAAGGTGCATCTGATTCAGAAGTAATTGAAGCAGCTAAGCTAGCAAATGCTCATAACTTCATAAGTGCACTTCCAGAAGGTTACTCAACCAAAGTAGGTGAAAGAGGTGTGCAACTATCTGGTGGACAAAGACAAAGGGTAGCCATTGCTAGAGCTGTTTTAAAGAATCCTGAAATCTTGCTTCTAGATGAAGCAACTAGTGCACTTGATGTCGAATCAGAGCGGATTGTACAACAAGCTCTTGACCGATTGATGCAGAATAGAACAACAGTTATGGTGGCACATAGGTTGTCAACAATAAGGAATGCAGATCAAATCTCAGTTTTGCAAGATGGAAAGATAATTGAGCAAGGGACTCATTCAAGTCTTATAGAGAATAAAGATGGACCATATTATAAATTAGTCAACCTTCAACAACAAAATCATCAATCATAG 3702 0.403 MESKEGDERKKEHKVPMLKLFSFADSYDYVLMFIGSIGAIVHGASVPIFFIFFGKLINVIGLAYLFPKEASHKVAKYSLDFVYLSVAILFSSWTEVACWMHTGERQAAKMRMAYLKSMLNQDISLFDTEASTGEVISAITSDIIIVQDALSEKVGNFLHYISRFIAGFTIGFVRVWQISLVTLSIVPAIALAGGCYAYVTIGLIAKVRKAYVRAGEIAEEVIGNVRTVQAFAGEERAVRSYKAALVKTYVNGRKAGLAKGLGLGSMHCVLFLSWALLVWYTSVVVHKNIANGGESFTTMLNVVISGLSLGQAAPDISAFIRAKAAAYPIFEMIERDTVSKKSSKTGRKLSKVDGHIQFKDVCFSYPSRPDVAIFNNLNLDIPAGKIVALVGGSGSGKSTVVSLIERFYEPISGQILLDKNDIRELDLKWLRQQIGLVNQEPALFATSIKENILYGKDDATLEELKRAVKLSDAQSFINNLPERLDTQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEALDRVMVGRTTIVVAHRLSTIRNADVIAVVQGGRIVETGNHEKLMSNPTSVYASLVQLQGASSLQRLPSVGPSLGHQSSISYSRELSRTGTSIGGSFRSDKDSIGRVGGDDVSKSKHVSAKRLYSMIGPDWPYGFFGTLCAFVAGAQMPLFALGISHALVSYYMDWETTQREVRKIAFLFCGGAVITITVHAIEHLFFGIMGERLTLRVREMMFTAILKNEIGWFDETTNTSSMLSSRLESDATLMRTIVVDRSTILLQNLGLVVASFIIAFLLNWRITLVVLATYPLIISGHISEKLFMKGYGGNLSKAYLKANMLAGEAVSNIRTVAAFCSEEKILDLYADQLVGPSKHSFRRGQIAGLFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALAPDLLKGNQMVASVFEVMDRKSEIKGDAGEELKTVEGTIELKRINFNYPSRPDVIIFKDFSLRVPSGKSVALVGQSGSGKSSVISLILRFYDPTSGKVLIDGKDITRINLKSLRKHIGLVQQEPALFATTIYENILYGKEGASDSEVIEAAKLANAHNFISALPEGYSTKVGERGVQLSGGQRQRVAIARAVLKNPEILLLDEATSALDVESERIVQQALDRLMQNRTTVMVAHRLSTIRNADQISVLQDGKIIEQGTHSSLIENKDGPYYKLVNLQQQNHQS 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01373 1233 Gene3D - 346 608 IPR027417 -
Mepo5g01373 1233 SMART AAA_5 1016 1202 IPR003593 GO:0016887
Mepo5g01373 1233 SMART AAA_5 383 569 IPR003593 GO:0016887
Mepo5g01373 1233 ProSitePatterns ABC transporters family signature. 495 509 IPR017871 GO:0005524|GO:0016887
Mepo5g01373 1233 Gene3D ABC transporter type 1, transmembrane domain 19 958 IPR036640 GO:0005524|GO:0016020
Mepo5g01373 1233 ProSitePatterns ABC transporters family signature. 1128 1142 IPR017871 GO:0005524|GO:0016887
Mepo5g01373 1233 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 356 592 IPR003439 GO:0005524
Mepo5g01373 1233 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 989 1225 IPR003439 GO:0005524
Mepo5g01373 1233 FunFam ABC transporter B family member 4 346 600 - -
Mepo5g01373 1233 CDD ABC_6TM_Pgp_ABCB1_D1_like 32 329 - -
Mepo5g01373 1233 Pfam ABC transporter 375 523 IPR003439 GO:0005524
Mepo5g01373 1233 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 348 594 IPR027417 -
Mepo5g01373 1233 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 33 321 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g01373 1233 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 670 956 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g01373 1233 Pfam ABC transporter 1008 1156 IPR003439 GO:0005524
Mepo5g01373 1233 FunFam ABC transporter B family member 4 979 1232 - -
Mepo5g01373 1233 Pfam ABC transporter transmembrane region 32 304 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g01373 1233 Pfam ABC transporter transmembrane region 670 942 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g01373 1233 SUPERFAMILY ABC transporter transmembrane region 656 973 IPR036640 GO:0005524|GO:0016020
Mepo5g01373 1233 CDD ABC_MTABC3_MDL1_MDL2 356 594 - -
Mepo5g01373 1233 SUPERFAMILY ABC transporter transmembrane region 20 326 IPR036640 GO:0005524|GO:0016020
Mepo5g01373 1233 CDD ABC_6TM_Pgp_ABCB1_D2_like 659 974 - -
Mepo5g01373 1233 CDD ABC_MTABC3_MDL1_MDL2 989 1227 - -
Mepo5g01373 1233 Gene3D - 979 1233 IPR027417 -
Mepo5g01373 1233 PANTHER ABC TRANSPORTER B FAMILY 3 593 IPR039421 -
Mepo5g01373 1233 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 982 1227 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01373 Mepo-Chr5 14222999 14232343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01373 651 1233 Calmodulin-binding Proteins AT2G36910 41.246 1.02e-126 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01373 K05658 - gmx:100819045 2162.11