Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01364 ATGAGCTTTCAAGACTTAGAATCCGGCCGGCGAAACCTAATCAACGGCAAACAAAACCCGACGCAAGCGGTTGCTTCCGGCGTATTTCAGATCAACACCGCCGTCTCCACTTTTCAAAGACTCGTTAACACTCTCGGAACTCCTAAAGACACGCCCGAACTCCGCGAGAAACTGCACAAGACGAGACTTCATATTGGACAATTGGTGAAGGATACGTCGGATAAGCTTAAACAAGCTAGTGAAATTGATCATCATGCTGATGTTAATGCAACCAAGAAGATAGCAGATGCTAAATTGGCGAAAGATTTTCAGGCAGTGTTGAAAGAATTTCAGAAGGCACAACGTCTTGCAGCTGAGAGGGAGACAGCTTACACTCCTTTTGTTCCGCATGAAGTTCAGCCATCCAGCTATACAGGCAGTGAAGTAGGTATTAGTTCCGATAAAAGTCAAGAACAGCATGCCCTTCTTTTGGAATCCAGAAGACAGGAGGTAATATCCTTAGATAATGAGATTTCCTTCAACGAGGCTATCATTGAGGAAAGAGAACAAGGCATTCAAGAAATCCAGCAGCAGATAGGTGAAGTAAATGAGATCTTCAAAGATCTTGCTGTGCTTGTTCATGAGCAAGGAGCAATGATTGATGATATTGGGTCCAACATTGAGAATTCTCATGAAGCCACTGCCCAGGCAAAATCGCAACTTGTTCAAGCTTCAAAGACACAAAGATCAAGCTCATCTTTGGTATATATAAATTTTGTTTTTATAATTGGGTTGTTGGTTTTAAGTATCCTCTTCCTCCCACCAAATTAA 810 0.4235 MSFQDLESGRRNLINGKQNPTQAVASGVFQINTAVSTFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSDKLKQASEIDHHADVNATKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYTPFVPHEVQPSSYTGSEVGISSDKSQEQHALLLESRRQEVISLDNEISFNEAIIEEREQGIQEIQQQIGEVNEIFKDLAVLVHEQGAMIDDIGSNIENSHEATAQAKSQLVQASKTQRSSSSLVYINFVFIIGLLVLSILFLPPN 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01364 269 Pfam SNARE domain 212 260 IPR000727 -
Mepo5g01364 269 FunFam Syntaxin-22 like 15 128 - -
Mepo5g01364 269 SUPERFAMILY t-snare proteins 17 230 IPR010989 GO:0016020|GO:0016192
Mepo5g01364 269 Pfam Syntaxin-like protein 25 124 IPR006011 GO:0016020
Mepo5g01364 269 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 175 237 IPR000727 -
Mepo5g01364 269 ProSitePatterns Syntaxin / epimorphin family signature. 181 220 IPR006012 GO:0005484|GO:0006886|GO:0016020
Mepo5g01364 269 CDD SynN 18 151 IPR006011 GO:0016020
Mepo5g01364 269 Gene3D - 15 128 - -
Mepo5g01364 269 SMART SynN_4 8 122 IPR006011 GO:0016020
Mepo5g01364 269 FunFam Syntaxin-22 like 168 267 - -
Mepo5g01364 269 PANTHER SYNTAXIN 21 256 IPR045242 -
Mepo5g01364 269 CDD SNARE_Qa 195 236 - -
Mepo5g01364 269 Gene3D - 169 266 - -
Mepo5g01364 269 SMART tSNARE_6 170 237 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01364 Mepo-Chr5 14158751 14162806 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01364 1 255 SNARE and Associated Proteins AT5G46860 74.131 4.20e-134 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01364 - - gmx:547656 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01364 5 14158751 14162806 Mepo5g01364 5 14158751 14162806 ECH
Mepo5g01364 5 14158751 14162806 Mepo1g02562 1 26960752 26966114 PCT