Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01356 ATGGAGCTATTTCCAGCACAACCAGATTTGTCTTTGCAAATTAGTCCTCCAAACACCAAACAAACAACAACAAGTAATTGGAAGAGAACAACATCAACTGAAGAAGAAATGGATTTGGGGTTTTGGAAAAGAGCTTTGGATTCAAGAAACTCTTTATCATCATCAATGGCTTCTAAAACTGATAATTACTCTTTTGACCTCTCTCTTTCAAATCCAACAAAGCCTTTAGATTCAAACAACAACACTTCAAATAACCTCATTCATCATCATCACTTCCAAAATAGTGGAAATAATAATGCAAACAACCCTTTTCAATCTTTTCATCAAAATCATTACTTTCAACACCCCCAGCCACTCTTTCAACACCATCAGCCACAACAACAACACCAAAGCTTAAGCCAAGAACTTGGTTTTCTTAGACCTATTAGAGGAATTCCTGTTTATCAAAACCCTCCTCCTTTGTCATTCCCTCAACTTCATAACCATAACCATAATCATAATCTTAATCATCTTCATGTTCTTGATGGTACTACTACTACACCTTCTTCTATTTCTAACACCAACAACACAAGTTCAAGCCCTTTTCAATCTCAAGCTTTGATGAGGTCAAGATTCTTGTCAAGATTTCCAGCAAAAAGAAGCATGAGAGCTCCAAGGATGCGTTGGACTACTACACTTCATGCTCGATTTGTTCATGCTGTTGAGCTCTTAGGTGGCCATGAAAGGGCTACTCCAAAATCAGTTCTTGAACTAATGGATGTGAAGGATCTTACATTAGCACATGTCAAGTCTCACTTACAGATGTATCGGACGGTGAAAACTACAGATAGAGTAGGAGCTTCATCAGGGCAATCAGATGTATACGATAATGGATCATCTGGAGACAATTCTGATGACATAATGTTTGACATTAACTCTTCAAGAAGATCATCTGATTTATCCATTAAGCAGCAAGGAAGATCAAGTGTTAATCAAGATAAGGAATGTTACGGTCTTTGGAGCAATTCTTCTCGGGAAGCTTGGTTACATGGTAAACCAAAGGTTGATTCTATTGGAAACATGCAATCTCTTGAGAAGGAAATGGATCCAAAGTGTCTAAGCTATGAGAGAATATCAGATGGCAGTTCATCTACAAACCTATCAGGATCAAGCCCAAAGAAACCTAATTTGGATTTGGAATTCACCCTAGGCCAACCTCTTTGA 1203 0.3791 MELFPAQPDLSLQISPPNTKQTTTSNWKRTTSTEEEMDLGFWKRALDSRNSLSSSMASKTDNYSFDLSLSNPTKPLDSNNNTSNNLIHHHHFQNSGNNNANNPFQSFHQNHYFQHPQPLFQHHQPQQQHQSLSQELGFLRPIRGIPVYQNPPPLSFPQLHNHNHNHNLNHLHVLDGTTTTPSSISNTNNTSSSPFQSQALMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRVGASSGQSDVYDNGSSGDNSDDIMFDINSSRRSSDLSIKQQGRSSVNQDKECYGLWSNSSREAWLHGKPKVDSIGNMQSLEKEMDPKCLSYERISDGSSSTNLSGSSPKKPNLDLEFTLGQPL 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01356 400 MobiDBLite consensus disorder prediction 11 30 - -
Mepo5g01356 400 MobiDBLite consensus disorder prediction 362 400 - -
Mepo5g01356 400 Gene3D - 217 274 - -
Mepo5g01356 400 NCBIfam myb-like DNA-binding domain, SHAQKYF class 218 271 IPR006447 GO:0003677
Mepo5g01356 400 MobiDBLite consensus disorder prediction 370 388 - -
Mepo5g01356 400 MobiDBLite consensus disorder prediction 1 32 - -
Mepo5g01356 400 SUPERFAMILY Homeodomain-like 215 271 IPR009057 -
Mepo5g01356 400 MobiDBLite consensus disorder prediction 175 196 - -
Mepo5g01356 400 FunFam Myb family transcription factor 216 274 - -
Mepo5g01356 400 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 399 IPR044847 GO:0000976|GO:0006355|GO:0010158
Mepo5g01356 400 MobiDBLite consensus disorder prediction 276 303 - -
Mepo5g01356 400 Pfam Myb-like DNA-binding domain 219 270 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01356 Mepo-Chr5 14034508 14040544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01356 1 399 G2-like Transcription Factor Family AT4G17695 38.795 8.66e-62 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo5g01356 Myb_DNA-binding 2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01356 - - psat:127119781 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01356 5 14034508 14040544 Mepo5g01356 5 14034508 14040544 ECH
Mepo5g01356 5 14034508 14040544 Mepo1g02564 1 26997279 27003460 PCT