Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01351 ATGGTAGAAGGAGGTAGAGTACGATTATCTGAGGAGGCTAGAAATGGGTTAGAATTTTTGAAGCGTAAAAGGCTTCAGCGTGCACAAGCCATTGCTGCCACCCAGACAAGTGCTGCTAACGTGATGAATAGAAGTGGAGGGGATGCTTTGAGAGGTTCACCTTCTTGTGGCACGAGATTGCATGGTAATCCAGATGTGTTTTTCAAGCGGAAGGTGGATAAGTTTGATACAAGCGATTTGGATTGGACTGATAAAATTCCAGAATGTCCTGTGTATTCTCCAACAAAGGAGGAATTTGAAGATCCTTTAGTTTATTTGCAGAAGATAGCTCCAGAAGCTTCTAAATATGGTATATGCAAGATTATTTCGCCTTTGAGTGCTTCTGTACCTGCTGGGGTTGTTTTAATGAAGGAGCAACCTGGATTCAAGTTTACAACCAGAGTGCAGCCTCTCCGCCTTGCTGAATGGGATACTGAAGACAAAGTCACATTTTTCATGAGTGGAAGAAATTATACATTCCGTGATTATGAGAAAATGGCAAACAAGGTTTTTGCACGAAGATATTGCAGCTCTGGATGTCTTCCTGCCACTTACTTGGAAAAGGAGTTTTGGCAGGAAATTGGTCGTGGGAAAATGGATACTGTTGAATATGCATGTGATGTTGATGGCAGTGCCTTTTCAACTTCTCCTACTGATCAGCTTGGGAACAGCAAATGGAATTTGAAGAAACTTTCCCGGTTGCCCAAATCAACTTTGCGTCTATTGGAAACGTCAATTCCGGGAGTAACAGAACCCATGCTATACATTGGAATGCTGTTTAGTATGTTTGCATGGCATGTGGAGGATCATTATTTGTACAGCATTAACTATCAGCACTGTGGAGCGTCAAAAACTTGGTATGGTATCCCTGGTCACGCAGCTTTGGAATTTGAAAGGGTGGTGAGAGAACATGTGTATTCTACGGATATTTTGTCAAGTGATGGAGAAGATGGAGCCTTTGATGTTCTCTTGGGGAAAACAACTTTATTTCCACCTAATATTTTGATGGAGCATAAAGTACCTGTCTATAAGGCTGTTCAAAAGCCAGGGGAGTTTGTAATAACCTTCCCTAGAGCGTATCATGCAGGCTTCAGTCATGGTTTCAACTGTGGAGAAGCAGTGAATTTTGCACTTGGTGATTGGTTTCCTCTTGGGGCTATTGCAAGCAGGAGATATGCACTTCTTAACAGGGTTCCTTTACTGCCCCATGAAGAACTTCTTTGCAAAGAAGCGATGCTTATTCATTCAAGCTTGGAGCTTGAAGATTCAGACTTTCCCTCTTCAGACTTGTTATCTCATCATAGAACAAAGATAGCTTTCATTAATTTGTTGCGTTTCCAGCATTGTGCTAGTTGGTTACTAATGAAATCAAGGGCGTGTATTAGTGTTTCTTCTCATTTGCGTGGCACAATTCTCTGTAGCCTGTGCAAACGTGACTGTTATGTAGCTTATGTTGACTGCAGCTGTCACATGCATCCTGTATGCTTACGCCATGATGTTAAATCTCTTGACCTCATCTGTGGGAGCAAACACACACTTTATCTGAGAGAGGATATTACGGATATGGAAGCTGCAGCAAAGATGTTTGAGCAGGAAGATGGGATATTGGATGAGATAAGCAAGCAATCCAAAAGTGACCAAAATATGTATTCATATCCTTTGTCAGATATGTTTCAGATAGCTGAAGCAAATGGATATGAACCTTATTGTGAGCTTAAACTTGATTCTATGATTGAATTTTATACAACTCCAGGACTGCCAACAAATAATCCAGAGTGTGGTACGCATAATCAATTTGTTTTGGGGCATTGCTCAGAAATTCCTAAACCAGAAGACGTTTCCTTTTCTGCTGCATCCACTCTTTGTTCTCTTTCAGAACCTCATGGCTGTTCCTCTGCTCCCAAAAATGCTGAGGGGCATTGTGAAGAACTTGGCGAAACAATATCCAACAGTGCATGTGAATCTTCTCTGTCCACTGCTTTGTATCATGAAAGCTCAGCTAAACTGCATGATCTACAGAAACCTGACATCAAGCCCATAGTGGATAACGACAGTGATGATTCTGATTCAGGAATATTTAGGGTAAAGCGCCCTTCTTCTCTTAAAGCAGAGAAAAGAAATCTGAAGATTATGGCTTCAAAACATTCTGAGCAGCAGGGACTTAAACGATTGAAGAAAGTCCTTCCTGAAGGAAAAAGCAACAGGCAACAAATGAATTTCAGAACCAGTGAATCAAGTGATAAATATAACCCTGTTAATCATAAAGTTGATATTGAGATTTCCTTGAAGAACAGATTTGCAAGGGGAAATGGCACTCCCATTTCGGCAAGATATAAAAAGTCAGGCAATGAGGAAGTAAGCATGCATATGCAACAAGATCACCACCGAAGAGAGAGGTTGCAGCAAACTTATAGAGAAGCGCCTTCCATTGAGATTGGGCCAAAGCGACTCAAAGTCCGAGGCCCGTCATTTTTGGGCATAGAGAGCAGCAGATTGAATTGA 2541 0.414 MVEGGRVRLSEEARNGLEFLKRKRLQRAQAIAATQTSAANVMNRSGGDALRGSPSCGTRLHGNPDVFFKRKVDKFDTSDLDWTDKIPECPVYSPTKEEFEDPLVYLQKIAPEASKYGICKIISPLSASVPAGVVLMKEQPGFKFTTRVQPLRLAEWDTEDKVTFFMSGRNYTFRDYEKMANKVFARRYCSSGCLPATYLEKEFWQEIGRGKMDTVEYACDVDGSAFSTSPTDQLGNSKWNLKKLSRLPKSTLRLLETSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYQHCGASKTWYGIPGHAALEFERVVREHVYSTDILSSDGEDGAFDVLLGKTTLFPPNILMEHKVPVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFALGDWFPLGAIASRRYALLNRVPLLPHEELLCKEAMLIHSSLELEDSDFPSSDLLSHHRTKIAFINLLRFQHCASWLLMKSRACISVSSHLRGTILCSLCKRDCYVAYVDCSCHMHPVCLRHDVKSLDLICGSKHTLYLREDITDMEAAAKMFEQEDGILDEISKQSKSDQNMYSYPLSDMFQIAEANGYEPYCELKLDSMIEFYTTPGLPTNNPECGTHNQFVLGHCSEIPKPEDVSFSAASTLCSLSEPHGCSSAPKNAEGHCEELGETISNSACESSLSTALYHESSAKLHDLQKPDIKPIVDNDSDDSDSGIFRVKRPSSLKAEKRNLKIMASKHSEQQGLKRLKKVLPEGKSNRQQMNFRTSESSDKYNPVNHKVDIEISLKNRFARGNGTPISARYKKSGNEEVSMHMQQDHHRRERLQQTYREAPSIEIGPKRLKVRGPSFLGIESSRLN 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01351 846 Pfam JmjC domain, hydroxylase 266 389 IPR003347 -
Mepo5g01351 846 Pfam jmjN domain 90 122 IPR003349 -
Mepo5g01351 846 ProSiteProfiles JmjN domain profile. 89 130 IPR003349 -
Mepo5g01351 846 SMART JmjN_1 88 129 IPR003349 -
Mepo5g01351 846 SMART cupin_9 233 406 IPR003347 -
Mepo5g01351 846 ProSiteProfiles JmjC domain profile. 236 406 IPR003347 -
Mepo5g01351 846 FunFam Lysine-specific demethylase isoform A 84 433 - -
Mepo5g01351 846 Gene3D Cupin 89 445 - -
Mepo5g01351 846 Pfam C5HC2 zinc finger 486 537 IPR004198 -
Mepo5g01351 846 SUPERFAMILY Clavaminate synthase-like 167 422 - -
Mepo5g01351 846 PANTHER LYSINE-SPECIFIC DEMETHYLASE 82 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01351 Mepo-Chr5 13945045 13952068 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01351 86 545 JUMONJI Transcription Factor Family AT2G34880 31.827 1.59e-62 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mepo5g01351 JmjC 1.8e-39 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01351 - - psat:127119779 1489.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01351 5 13945045 13952068 Mepo5g01351 5 13945045 13952068 ECH