Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01339 ATGGGCAATAATGAGATGGATAAAACAGCAAAAGAGAAGGAGTCGAAGACACCTCCACCAACATCACAGGAGCAGCCTTCGACCACCACAAGCACCGTACCAGTTAATACTGACTGGGCCAGCTTTCAGGCATATTCTCCTATGCCTCCACATGGATTCATGGCGTCAAGTCCCCAAGCTCACCCTTATATGTGGGGTGTCCAGCACATGATGCCTCCTTATGGTACTCCACCACATCCCTATGTTGCAATGTATCCACATGGTGGCATATATGCTCATCCATCCATGCCTCCGGGATCTTATCCATATCCTTATGCCATGCCTACTCCAAACGGTATTGCTGAGGCCTCCGGAAACACTCCTGCTAGCATGGAAACTGATGGTAAACCTCCTGAAGTGAAGGAAAAATTGCCAATCAAAAGGTCAAAAGGAAGTTTAGGTAGTTTGAACATGATTACAGGGAAAAATAATGAACATGGTAAAACAGCGGGGACATCTGCTAATGGAATTCACTCAAAGAGTGGTGAAAGTGGAAGTTATGAAGGTACTAGTGAAGGAAGTGATGCAAATTCTCAGAATGGCTCTCAATTGAAATCGGGGGACAGGCTGGATTCTTTTGAAGGTGAACCATCTCAAAATGGCAGTTCAGTGCATACTTCACAAAATGGGGGACTTAACGCACCTCATACAGTGGTTAATCAAACTATGTCTGTCATTCCTGTCTCGGCAAGTGGTGCTCCTGGAGCTGTTTCTAGCCCCGCAACAAACTTAAATATAGGAATGGATTATTGGAATACGCCAACTTCATCCAACATTCCCGCTCTCCGTGGAAAGGTGCCGTCTACCACAGTTGCGGGAGGGGTGGTTACTGGTGGATCACGGGATAGTGTTCAGTCACAACTTTGGCTACAGGATGAAAGAGAGCTTAAAAGACAAAGACGAAAGCAGTCTAATAGGGAATCTGCTCGGAGATCCAGGTTGCGCAAGCAGGCTGAGTGCGACGAGCTCGCTCAGCGTGCTGATGTTTTGAAAGAAGAAAATGCTTCCCTCCGATTAGAAGTAAATCGCATTAGAAGCGAGTATGAGCAGCTACTTTCCGAGAATGCAGCTCTCAAGGAGAGACTTGGGGAACAACCAGGGAACGATCAACACATGTGTAACGACACTCAACAAAGTGGACAGACAGAGGTTGTGCAGGGTGGTCATTAG 1209 0.4673 MGNNEMDKTAKEKESKTPPPTSQEQPSTTTSTVPVNTDWASFQAYSPMPPHGFMASSPQAHPYMWGVQHMMPPYGTPPHPYVAMYPHGGIYAHPSMPPGSYPYPYAMPTPNGIAEASGNTPASMETDGKPPEVKEKLPIKRSKGSLGSLNMITGKNNEHGKTAGTSANGIHSKSGESGSYEGTSEGSDANSQNGSQLKSGDRLDSFEGEPSQNGSSVHTSQNGGLNAPHTVVNQTMSVIPVSASGAPGAVSSPATNLNIGMDYWNTPTSSNIPALRGKVPSTTVAGGVVTGGSRDSVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRADVLKEENASLRLEVNRIRSEYEQLLSENAALKERLGEQPGNDQHMCNDTQQSGQTEVVQGGH 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01339 402 SUPERFAMILY Leucine zipper domain 309 365 IPR046347 GO:0003700|GO:0006355
Mepo5g01339 402 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 388 IPR044827 GO:0003700|GO:0006355|GO:0043565
Mepo5g01339 402 Pfam bZIP transcription factor 306 368 IPR004827 GO:0003700|GO:0006355
Mepo5g01339 402 Pfam Disordered region downstream of MFMR 135 273 - -
Mepo5g01339 402 SMART brlzneu 306 370 IPR004827 GO:0003700|GO:0006355
Mepo5g01339 402 MobiDBLite consensus disorder prediction 382 402 - -
Mepo5g01339 402 Pfam G-box binding protein MFMR 1 97 IPR012900 -
Mepo5g01339 402 CDD bZIP_plant_GBF1 311 361 IPR045314 GO:0003700|GO:0006355
Mepo5g01339 402 Gene3D - 309 363 - -
Mepo5g01339 402 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 313 328 IPR004827 GO:0003700|GO:0006355
Mepo5g01339 402 MobiDBLite consensus disorder prediction 19 35 - -
Mepo5g01339 402 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 308 371 IPR004827 GO:0003700|GO:0006355
Mepo5g01339 402 MobiDBLite consensus disorder prediction 1 18 - -
Mepo5g01339 402 MobiDBLite consensus disorder prediction 308 328 - -
Mepo5g01339 402 MobiDBLite consensus disorder prediction 375 402 - -
Mepo5g01339 402 MobiDBLite consensus disorder prediction 146 228 - -
Mepo5g01339 402 MobiDBLite consensus disorder prediction 114 228 - -
Mepo5g01339 402 MobiDBLite consensus disorder prediction 1 35 - -
Mepo5g01339 402 Coils Coil 326 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01339 Mepo-Chr5 13726871 13733531 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01339 1 396 bZIP Transcription Factor Family AT2G35530 61.951 8.68e-163 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo5g01339 MFMR_assoc 5.2e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01339 K09060 - gmx:778122 632.869