LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo5g01308	ATGGGTTACGAAGATAATCCGTATCGTGATGAAGACGGTGAACCGTTGATGGATTACGACGACGTACAATCCGACGGCGAAGGATCACCGGAGCCACAACAACTCGACGATTTTGAAGAAGAAGATGTTGACAATTTTCATGATCGTGCTCGGTCACAGACACCGGTTTACGACAACGATTCGTCGAAATCAAAGCCGAGGAAACGCTTGATTAAGAAAAGCGATACCGGAAAACAGTCAATGGCGCTGCCACCGGAGCTGGAGGATGAATTGGAGGAGGAGGATGAAGGGAGGAAGAGGAAGAAGGGGAAGGAAAGTGGGTCTGGGAAGAAGGAGAAGAGGCTGAAAGGGGGTAGTAGTAGTAGTGGAAAGGGTGGGTCTAGATTTGGTGGTTCTAAGAGAGGAGTTGGTGGGAAAAGTGGGAATGATCGTGAAGGTGAAGTTAATGAGATGTGGGATGCACTTGCTGGAAATTCTGAGGATGATAATGAAGGTGCCAGGAATATGGATGATGATAACTTTATAGACGACACTGGAGTAGAACCTGCTTTATATGGTTATGATGAACCGCGTTCTCCTGGCGATGCTCCACAGGCTGAGGAAGGTGAGGAAGATGATGAAATCAAGGATCTTTTCAAGATGGGGAAGAAAAAGAAGAAGAACGAGAGAAGTCCTGCAGAAATTGCTTTATTAGTTGAGAATGTTATGGCTGAGCTTGAGGTTACAGCAGAAGAGGATGCGGAGCTTAATCGGCAGCACAAGCCCGCAGTCAATAAACTCAAGAAGTTGCCTCTTCTTATAGAAGTCCTCTCAAAGAAACAACTTCAGCTAGAGTTTTTAGATCACGGAGTGCTAAATTTATTGAAGAGTTGGCTTGAGCCACTTCCTGATGGAAGTCTGCCAAATATCAACATACGAACAGCAATTTTGAAGATTTTGAATGATTTACCTATAGATCTAGAGCATTACGATAGAAGAGAACAGCTGAAGAGAAGTGGTCTTGGAAAGGTTATTATGTTTTTATCAAGGTCCGATGAAGAAATCCATGTAAATAGGAGATTAGCCAAGGATTTGGTTGATAAATGGAGCCGACCTATATTTAATAAGAGTACTCGGTTTGAAGACATGCGAAATACTGAGGATGATAGGGTTCCTTACAGGAGGCCATCGGTTAAAAAGCCAGCAGCTAAAGCTGCAGGGATGCAATCAAGAGACGGTGATCTTGATTTGGATCTTTCACAGCCTAGGTCCGGAGAGTCGTCTTCCAGGCAACATGCATCAAGGCCAGAAGCCACACCTTTGGATTTTGTGATCCGCCCCCAATCTAAAATTGACCCTGATGAAATCAGAGCACGTGCAAAACAAGCTACACAAGACCAGCATCGTATGAAGATGAATAAGAAATTGCAGCAGTTGAGGGCACCAAAAAAGAAGCAGCTTCAGGCTACAAAACTGAGTGTGGAAGGTCGTGGTATGGCCAAATACTTTTAA	1491	0.4433	MGYEDNPYRDEDGEPLMDYDDVQSDGEGSPEPQQLDDFEEEDVDNFHDRARSQTPVYDNDSSKSKPRKRLIKKSDTGKQSMALPPELEDELEEEDEGRKRKKGKESGSGKKEKRLKGGSSSSGKGGSRFGGSKRGVGGKSGNDREGEVNEMWDALAGNSEDDNEGARNMDDDNFIDDTGVEPALYGYDEPRSPGDAPQAEEGEEDDEIKDLFKMGKKKKKNERSPAEIALLVENVMAELEVTAEEDAELNRQHKPAVNKLKKLPLLIEVLSKKQLQLEFLDHGVLNLLKSWLEPLPDGSLPNINIRTAILKILNDLPIDLEHYDRREQLKRSGLGKVIMFLSRSDEEIHVNRRLAKDLVDKWSRPIFNKSTRFEDMRNTEDDRVPYRRPSVKKPAAKAAGMQSRDGDLDLDLSQPRSGESSSRQHASRPEATPLDFVIRPQSKIDPDEIRARAKQATQDQHRMKMNKKLQQLRAPKKKQLQATKLSVEGRGMAKYF	496

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo5g01308	496	MobiDBLite	consensus disorder prediction	94	118	-	-
	Mepo5g01308	496	MobiDBLite	consensus disorder prediction	441	466	-	-
	Mepo5g01308	496	MobiDBLite	consensus disorder prediction	378	482	-	-
	Mepo5g01308	496	Coils	Coil	232	252	-	-
	Mepo5g01308	496	ProSiteProfiles	TFIIS N-terminal domain profile.	286	369	IPR017923	-
	Mepo5g01308	496	PANTHER	PROTEIN IWS1 HOMOLOG 1	1	495	IPR044204	GO:0009742\|GO:0032784
	Mepo5g01308	496	Gene3D	Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	225	372	IPR035441	-
	Mepo5g01308	496	MobiDBLite	consensus disorder prediction	414	428	-	-
	Mepo5g01308	496	MobiDBLite	consensus disorder prediction	1	206	-	-
	Mepo5g01308	496	Pfam	TFIIS helical bundle-like domain	311	366	IPR017923	-

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	IWS1	Mepo5g01308		Med26	7.7e-13	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo5g01308	K17498		-	gmx:100801805	735.717