Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01296 ATGGCAGACAGTTCAGTATCATTTTTACTTGACAAGCTAACATGGTTACTTCAAGAAGAAGTAAATCTACAAAGAGGCGTCCGTGAAGATGTTCAATATATCAAAGACGAACTCGAACGCCACAAGGCCATCTTGATGTTAGCTGATTCATTGGAAGACAAAGATCCTGAACTCAAAGTATGGGTTAAAAGAGTAAGAGATATTGCTCAAGACATGGAAGATGCTATAGATGAATACTATCTTCGCCTTGTCGATCATCAACAAGGAAAAATCAGATCTACTTTTCACAACATTCTTTTTGGCATTAACACCATGAAAGGTAGACACAAAATAGCTTCAAATATACAAAGAATCAAATCCAAAGTTGAAGTTATCTCGCACAGACGTCCAATCATACCTTCAAGCTCAAGTCAAAGGCTTTCATCAAGGCTTGATAGTCAAGGTGATGCCCTTTTGCTAGAGGAAGCTGATTTAGTTGGAATTGAACAACCAAAGAAGCAGCTCTGTGATTTGCTTTTCAAAGATGAATCAAATAGAGCAGTGATTTCCATTTATGGTATGGGAGGTTTAGGGAAGACTACAATAGCTAAACAAGTCTATGATGATCCAAAAGTCAAGAAGCGTTTTAGGATTCATGCTTGGGTTAATCTCTCTCAATCTTTCAAAATGGAAGAGTTACTAAAAGACCTTGTTGAACAGATTCATATTCTCATTGGAAAACCAGTTCCAGAAGCAGTTGAAAGGATGAAAAGTGACAAGCTGAAAGAGTTGATTAAGGATTTGCTTCAGAGAAGCAGATACCTAATTGTGCTTGATGATGTGTGGCATGTGAATGTATGGGATGCTGTGAGGCTTGCTTTGCCTAATAACGACCGCGGAAGTCGAGTGATGCTTACGACACGCAAGAAAGATATAGCTTCGTATTCTTGTGCTGAATTAGGTAAGGACTTTCACCTTGAATTCTTACCTGAGCAAGAAGCTTGGTCTCTTTTTTGTAGGAAGACATTTCAAGGAAATAATAACTCATGTCCTCCTCATCTTGAAGAAGTTTGTAGGAATATCTTGAAATTGTGTGGAGGGTTACCACTAGCAATTGTGGCAATAAGTGGTGCTTTGGCTACAAAAGGAAGATCAAACATAGAAGAGTGGCATATAGTTTGCAGAAGTTTTGGTTCTGAGATTGAAGGCAATGACAAATTGGAAGGTATGAAGAAAGTACTTTCCTTAAGTTTCAATGAGTTACCTTACCATCTTAAATCATGCTTGTTGTATTTAAGCGTCTTTCCAGAATTTCACGCTATCGAGCATATGAGATTGATTCGATTGTGGATAGCTGAAGGATTTGTAAATGGTGAAGATGGTAAGACACTAGAGGAAGTTGCAGATCGTTACCTTAAGGAGCTTTTGAACAGAAGTTTGCTCCAAGTGGTAGAGAAAACCACTGATGGAAGGATGAAGACTTGTCGAATGCATGACCTTCTAAGGGAGATTGTTAATTTCAAGTCAAGGGATCAGAACTTTGCAACAATAGCCAAAGAACAAGATATGGTATGGCCGGAACGAGTTCGTCGTTTATCGGTCATAAATTCATCACATAATGTACTTAAACAGAATAAGACCATATTCAAACTTAGGTCTCTGCTAATGTTTGCAATATCAGATTCAGTCAATCATTTTTCTATCCATGAATTATGCTCCTTCACTGGTGTTAAGTTGCTCAATGTGCTAGACTTGCAAGATGCACCTTTGGAGGCTTTTCCTGTTGAAATTGTCAACCTGTACCTTCTGAAGCATCTAAGTTTGAAGAATACAAAGGTGAAAAACATTCCAGGTTCAATTAAGAAGCTGAAATACTTGGAAACGTTGGATCTTAAACACACTTATGTCACGGAATTGCCTGTTGAAGTTGCGGAGCTGAAACGGTTACGCCACCTCCTGGTGTATCGCTACAAGATTGAGTCATATGCTCACTTCCACTCAAAGAATGGCTTTAAGGTGGCTGCACCTATAGGAAACATGCAATCTTTGCAAAAGCTTTGTTTCATTGATGTAGATCAAGGAAGTGCAGCGCTGATGGTAGAGTTAGGAAGACTCACTCAACTTAGGAAGCTAGGCATTAGAAAAATGAGGAAAGAAGATGGTGCTGCTTTGTGTTCATCTATTGAGAAGATGATCAATCTTAGATCACTTTCCATAACTGCAATAGAAGAAGATGAGGTAATCAATATTCATGACATTTCCAACCCTCCTCGCTATCTTCAGCAGTTATACTTGAGCGGACGTTTAGAGAAGTTTCCACAATGGATAAATTCTTGCAAGAACTTAGTAAGAGTTTTCTTAAAGTGGAGCAGGTTAGAGGAGGATCCTCTTGTGTGTCTTCAAGGTTTGCCGAATCTTCGACATCTTGAATTTCTTCAAGTATATATCGGTGAAATGTTGCATTTCAATGCAAAAGGGTTTCCAAGTCTAAAGGTGTTGGGTCTTGATGATTTAGAAGGACTCAAATATATGATAATTGAAGAAGGAGCAATGAAAGGTCTTAAGAAGTTGGTCATGCAACGATGTGGTTCATTCAAGAATGTACCGTTAGGCATTGAGCACTTAACTAAGCTAAAAACAGTTGAGTTCTTTGATATGCCCGATGAGTTGATTATGGATCTGCGTCCAAATGGAGGCAAAGATTATTGGAGAGTACAAAATGTTCCAACAGTTTATTCAACTTATTGGAGGGATGGTGGTTGGGATGTTTATTCATTAGAGACTTTTGGGGAGAGAAAGAGTGCAAAGAGGACTTGTGAGCTTCCCACTCTTTGGAAGGTTTAA 2823 0.3868 MADSSVSFLLDKLTWLLQEEVNLQRGVREDVQYIKDELERHKAILMLADSLEDKDPELKVWVKRVRDIAQDMEDAIDEYYLRLVDHQQGKIRSTFHNILFGINTMKGRHKIASNIQRIKSKVEVISHRRPIIPSSSSQRLSSRLDSQGDALLLEEADLVGIEQPKKQLCDLLFKDESNRAVISIYGMGGLGKTTIAKQVYDDPKVKKRFRIHAWVNLSQSFKMEELLKDLVEQIHILIGKPVPEAVERMKSDKLKELIKDLLQRSRYLIVLDDVWHVNVWDAVRLALPNNDRGSRVMLTTRKKDIASYSCAELGKDFHLEFLPEQEAWSLFCRKTFQGNNNSCPPHLEEVCRNILKLCGGLPLAIVAISGALATKGRSNIEEWHIVCRSFGSEIEGNDKLEGMKKVLSLSFNELPYHLKSCLLYLSVFPEFHAIEHMRLIRLWIAEGFVNGEDGKTLEEVADRYLKELLNRSLLQVVEKTTDGRMKTCRMHDLLREIVNFKSRDQNFATIAKEQDMVWPERVRRLSVINSSHNVLKQNKTIFKLRSLLMFAISDSVNHFSIHELCSFTGVKLLNVLDLQDAPLEAFPVEIVNLYLLKHLSLKNTKVKNIPGSIKKLKYLETLDLKHTYVTELPVEVAELKRLRHLLVYRYKIESYAHFHSKNGFKVAAPIGNMQSLQKLCFIDVDQGSAALMVELGRLTQLRKLGIRKMRKEDGAALCSSIEKMINLRSLSITAIEEDEVINIHDISNPPRYLQQLYLSGRLEKFPQWINSCKNLVRVFLKWSRLEEDPLVCLQGLPNLRHLEFLQVYIGEMLHFNAKGFPSLKVLGLDDLEGLKYMIIEEGAMKGLKKLVMQRCGSFKNVPLGIEHLTKLKTVEFFDMPDELIMDLRPNGGKDYWRVQNVPTVYSTYWRDGGWDVYSLETFGERKSAKRTCELPTLWKV 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01296 940 CDD RX-CC_like 2 126 IPR038005 -
Mepo5g01296 940 Gene3D - 411 501 IPR036388 -
Mepo5g01296 940 FunFam Probable disease resistance protein At1g61300 148 313 - -
Mepo5g01296 940 Pfam Rx N-terminal domain 6 88 IPR041118 -
Mepo5g01296 940 Gene3D - 321 410 IPR042197 -
Mepo5g01296 940 Gene3D Ribonuclease Inhibitor 661 883 IPR032675 -
Mepo5g01296 940 Pfam NB-ARC domain 162 412 IPR002182 GO:0043531
Mepo5g01296 940 SUPERFAMILY L domain-like 489 883 - -
Mepo5g01296 940 Gene3D - 141 312 IPR027417 -
Mepo5g01296 940 Gene3D - 5 112 - -
Mepo5g01296 940 PRINTS Disease resistance protein signature 181 196 - -
Mepo5g01296 940 PRINTS Disease resistance protein signature 358 372 - -
Mepo5g01296 940 PRINTS Disease resistance protein signature 614 630 - -
Mepo5g01296 940 PRINTS Disease resistance protein signature 261 275 - -
Mepo5g01296 940 PANTHER DISEASE RESISTANCE PROTEIN RP 33 855 IPR044974 GO:0006952
Mepo5g01296 940 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 425 IPR027417 -
Mepo5g01296 940 Gene3D Ribonuclease Inhibitor 512 660 IPR032675 -
Mepo5g01296 940 FunFam Probable disease resistance protein At1g63360 411 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01296 Mepo-Chr5 13196705 13200089 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01296 182 627 WRKY Transcription Factor Family AT5G45050 21.382 8.53e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01296 K13457 - gmx:100305458 1451.8